Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2045 ATGGTCCACGTGCGTGAGCTGAACGCGCAGCTTACTCAGATCAGCAGCCACCTCGACGCGGAGAAGAAGCGTGCCGAGGAGCTGAATCTGGCGAAGAAGGAAGCCCAGGCCCATCTGTGGTGGGCCCGGTCCGTGGATGGGATGAGCGTGGCCCAACTGGAGCAGTTCAAGGCGGCGTTGGAGGAAGTGAAGAAGCAGGTGGCGTTTCTTGCTGATAGGGCTATGCTCGAGAGTGTTGTGAACCCGACTCATCAGTTTTTCCCAGCAGGGGTTTCTTCCTCTTCCTCTTCATCTTCCAATTCAAACCTTGTGCATCATCAGCCACCAATGCTTCAGAACTTTATGTTTCATGATGGGAGCATGATGCGCCACCATGGCTTTAATAACATGGGAATGGGAGGATGTTTCTTTTGA 414 0.5338 MVHVRELNAQLTQISSHLDAEKKRAEELNLAKKEAQAHLWWARSVDGMSVAQLEQFKAALEEVKKQVAFLADRAMLESVVNPTHQFFPAGVSSSSSSSSNSNLVHHQPPMLQNFMFHDGSMMRHHGFNNMGMGGCFF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2045 137 Coils Coil 53 73 - -
Aed1g2045 137 Gene3D - 2 82 - -
Aed1g2045 137 PANTHER MADS BOX PROTEIN 6 102 - -
Aed1g2045 137 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL14 6 102 - -
Aed1g2045 137 Coils Coil 4 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2045 Aed-Chr1 17191084 17191497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2045 4 128 Type I MADS-box Gene Family AT5G60440 34.127 1.85e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2045 - - gmx:100779916 171.785