Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2031 ATGTCCTCCTCCTCAACAATGCCTCCCTTCCCGGAATCCGATGAGCCCGCCGCCGCCATCGCCGCCCTCCTCGACGCCGAGCCCCACCACATGCCGGAAAAAGACTACCTCCGCCGCTGCCGCGACCGCTCCCTCGACGTCACCGCTCGCTTAGACGCCGTCAACTGGATCTTAAAGGTTCACGCATTCTACCAGTTCTCCCCAGTAACGGCGTTTCTCTCCGTCAACTATTTCGACCGTTTTCTCTCTCGATGCTCTCTTCCGCAACAAAGTGGGTGGCCGTTTCAGCTGCTATCAGTGGCATGTTTGTCTCTAGCAGCGAAAATGGAGGAGCCCCATGTGCCCTTCTTACTGGACCTCCAATTGTTCCAGCCCAAGTTCATCTTCGAGCCCAAAACGGTTCAGAGAATGGAACTCTGGGTCATGTCCAATCTCAAATGGAGACTCCGCTCTGTCACCCCCTTCGATTTTCTTCATTATTTCATCTCCAAGCTTCCTTCTTCTTCCGAATCGCTGGATCAGTTTTTCTCCACAGCCTCCAACCTCATTCTCAGCACCACTCGTGTGATTAACTTTTTGGGATTTGCGCCGTCCACCGTGGCAGCCGCCGCCGTGCTCTGCTCCACCGGCCGTGACATTGTTTCCGTCAACGCCCAATTGCCGCTGAGTTTTCATGACCGAGTAAACAATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTATGTGGTGGACACGTGTCCCGCATCCATCAAAGCCAGAATAATCGAGCCTGCGCCGCCGTCTAGCCCCGTCGGCGTGCTCGACGCCGCAACCTGTGGGAGCTGCGACACACCTTCCGAGAGGAATTTCGCTGGCTCAACCGAGGAACAAGCTGAGCCGCCAAATAAACGGCTTCGATCGGATGCACCGCAGCCGTAG 924 0.5563 MSSSSTMPPFPESDEPAAAIAALLDAEPHHMPEKDYLRRCRDRSLDVTARLDAVNWILKVHAFYQFSPVTAFLSVNYFDRFLSRCSLPQQSGWPFQLLSVACLSLAAKMEEPHVPFLLDLQLFQPKFIFEPKTVQRMELWVMSNLKWRLRSVTPFDFLHYFISKLPSSSESLDQFFSTASNLILSTTRVINFLGFAPSTVAAAAVLCSTGRDIVSVNAQLPLSFHDRVNNEMVRCCHQLMEEYVVDTCPASIKARIIEPAPPSSPVGVLDAATCGSCDTPSERNFAGSTEEQAEPPNKRLRSDAPQP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2031 307 MobiDBLite consensus disorder prediction 279 307 - -
Aed1g2031 307 Gene3D - 21 240 - -
Aed1g2031 307 PANTHER CYCLINS 7 299 IPR039361 -
Aed1g2031 307 CDD CYCLIN 50 139 IPR013763 -
Aed1g2031 307 Gene3D - 33 150 - -
Aed1g2031 307 PANTHER CYCLIN-D2-1-LIKE 7 299 - -
Aed1g2031 307 ProSitePatterns Cyclins signature. 50 81 IPR006671 -
Aed1g2031 307 Pfam Cyclin, N-terminal domain 23 149 IPR006671 -
Aed1g2031 307 SUPERFAMILY Cyclin-like 19 149 IPR036915 -
Aed1g2031 307 SMART Cyclin_C_2 152 277 IPR004367 -
Aed1g2031 307 SMART cyclin_7 55 143 IPR013763 -
Aed1g2031 307 Pfam Cyclin, C-terminal domain 152 244 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2031 Aed-Chr1 17098696 17100618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2031 16 247 Core Cell Cycle Gene Families AT1G70210 47.679 2.83e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2031 K18810 - gmx:100798996 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2031 1 17098696 17100618 Aed1g2031 1 17098696 17100618 ECH