Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1999 ATGGGCGATGCACTAAAAAATGAAGTGCAGCACAGGGGTGGTGCACCTGCTGCATCTCCCAAGAGGGACATTGCATTGTTTGAAGGAGACAAAGATTTTGAGCTGCACAATGGCATTGAATTTGAATCCCATGAAGCAGCATATTCTTTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAGTTTGCATGCTCTAGATATGGAGTTACACCTGAGTCTGACAGTGGGAGCAGTCGAAGACCTAGTGTAAAGAAAACAGATTGCAAAGCTTGCATGCATGTGAAGAGAAAGCCAGATGGAAAGTGGATCATTCATGAATTTATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATATGAAATTAGCTGAAAAGAATAATATTGATATCTTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAGGCAATCTACTGGCTGCCAATCTAAGATAGAGGCTGGAGATGGCACTATCGCAAAATTTACAGTTCAAGATTATGAGAAGGATGAAGAGTTTTTGGTAACTTGGAATGAGTTGAGCTCAGAGGTCTCTTAA 654 0.3899 MGDALKNEVQHRGGAPAASPKRDIALFEGDKDFELHNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRKPDGKWIIHEFIKEHNHELLPALAYHFRIHRNMKLAEKNNIDILHAVSERTRKMYVEMSRQSTGCQSKIEAGDGTIAKFTVQDYEKDEEFLVTWNELSSEVS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1999 217 Pfam FAR1 DNA-binding domain 49 136 IPR004330 -
Aed1g1999 217 MobiDBLite consensus disorder prediction 1 22 - -
Aed1g1999 217 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 9 183 - -
Aed1g1999 217 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 179 217 IPR031052 GO:0006355
Aed1g1999 217 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 179 217 - -
Aed1g1999 217 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 183 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1999 Aed-Chr1 16901977 16905768 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed1g1999 FAR1 2.4e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1999 - - gmx:100805377 364.77