Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1995 ATGCTGCGTTTGTGCTGTGTCCCTCTCGATTGCTGCTTCCGCCGTGGTGGCCGCGCCGCCGACGCACTTCTCTGGCACACCGACTTGAAGCCCCATGCCTCCGGCGACTTCTCCATCGCCGTCGCCCAGGCCAATTACAGTCTAGAAGATCAGAGCCAAGTCTTCACCACCCCTTACGCCACCTACGTCGGCGTCTACGACGGCCACGGCGGTCCTGAAGCTTCCAGATTCGTCAACAGGCGCCTCTTCCCTTATTTGCACAAATTTGCGACTGAGCATGGAGGGTTGTCTGTGGATGTGATTAAAAAGGCGTTCAGTGCCACAGAGGAGGAATTCTTGCATTTGGTGAAGCTATCCTTGCCCATTAGTCCCCAGATTGCTTCTGTGGGATCATGTTGCCTCTTTGGTGCAATTTCTGATAATGTGTTGTATGTTGCCAACCTCGGAGACTCGAGAGCTGTTCTTGGCAGGAGGGCTACAGAGAGAAAGAACAGTCCGGTGGTGGCACAGCGTTTGTCAACTGATCATAATGTAGCTGATGAGGAGGTGAGACGAGAAGTTGAAGCTCTCCATCCCGATGACTCACACATTGTGGTTTATAGCCGCGGCGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCTATCGGGGATGTGTATTTGAAGAAACCTGATTTCTACCGGGACCCGGTTTTTCAGCAGTTTGCAAATACTATTCCTTTGAGGCGTCCTGTAATGACAGCTGAACCATCAATCATTATTAGGGAGCTTAAGTCAGAGGATTTATTCTTGATATTTGCATCAGATGGCCTCTGGGAACAATTAAGTGATGAGGCAGCAGTTCAGATGGTTTTCAAACATCCAAGAGCTGGAATTGCCAAGAGACTGGTAAGAGCTGCTCTCAACGAAGCTGCAAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATTGACAAAGGAATAAGACGACATTTCCATGATGATATCACAGTTATTGTAATCTATCTTGATCACCATGCAGGCTCCTCCAATGGTAGATTTAAGCAAACTGCTGCTGGCTATACAACTGCCCCTGTTGATATTTTTTCCCTAAATGCGGATGACGCAGAAGCAGAAAAGAGTATGCTTAGTGCAGTTGCCTAA 1149 0.4804 MLRLCCVPLDCCFRRGGRAADALLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTTPYATYVGVYDGHGGPEASRFVNRRLFPYLHKFATEHGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAISDNVLYVANLGDSRAVLGRRATERKNSPVVAQRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFANTIPLRRPVMTAEPSIIIRELKSEDLFLIFASDGLWEQLSDEAAVQMVFKHPRAGIAKRLVRAALNEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHAGSSNGRFKQTAAGYTTAPVDIFSLNADDAEAEKSMLSAVA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1995 382 Gene3D - 27 347 IPR036457 -
Aed1g1995 382 PANTHER ALPHABET, ISOFORM E-RELATED 4 374 - -
Aed1g1995 382 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 374 - -
Aed1g1995 382 Pfam Protein phosphatase 2C 61 307 IPR001932 -
Aed1g1995 382 CDD PP2Cc 49 338 IPR001932 -
Aed1g1995 382 SUPERFAMILY PP2C-like 45 340 IPR036457 -
Aed1g1995 382 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Aed1g1995 382 SMART PP2C_4 30 336 IPR001932 -
Aed1g1995 382 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1995 Aed-Chr1 16874601 16877989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1995 21 345 PP2C-type Phosphatase Gene Family AT3G51370 57.057 8.82e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1995 - K01102 gmx:100812137 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1995 1 16874601 16877989 Aed1g1995 1 16874601 16877989 ECH
Aed11g1458 11 19055050 19058709 Aed1g1995 1 16874601 16877989 PCT