Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1983 ATGATGATCACAGAAAATGAAGTGATGAACGGAGACAAGGACAATTATGGAAGCGAAGATGAGAACCCCAAAGAGTGGTTGAACCTGAGTATAGGTGGTGTTGGTGGTGGTGCTTCACTTTCAACAGCTGGTGATGATGATTCACAAGCGAGAGCAGCCACTGCAAAAGTATTTTCATGCAACTTCTGCATGAGGAAGTTCTTCAGCTCACAAGCCCTAGGGGGTCATCAGAACGCCCACAAGAGGGAAAGGGGAGCTGCGAGAAGATACCAATCTCAGAGGTCGATGCCAATAATGGGGTTCTCAATGAACACACCAACTATACTTCGAACACTTGGTGTCCAGCCCCATTCACTTGTACACAAGCCATGCAGAGGTGGCATGGTGGCACCAAGCTTTCATGATAGGCTTGGGATGGCATGGACACCTTTCCCATCGTCCGAGGATCAAGCAGATATGGTGTGGCCAGGCAGCTTTCGCTTGGTTCCACAACAGCCACAACCACAGCCACCACAGGAGCCACTCAAGCTTGATTTAGACCTCAGACTCTGA 552 0.4946 MMITENEVMNGDKDNYGSEDENPKEWLNLSIGGVGGGASLSTAGDDDSQARAATAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMPIMGFSMNTPTILRTLGVQPHSLVHKPCRGGMVAPSFHDRLGMAWTPFPSSEDQADMVWPGSFRLVPQQPQPQPPQEPLKLDLDLRL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1983 183 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 183 - -
Aed1g1983 183 SUPERFAMILY beta-beta-alpha zinc fingers 55 84 IPR036236 -
Aed1g1983 183 Gene3D Classic Zinc Finger 46 100 - -
Aed1g1983 183 MobiDBLite consensus disorder prediction 161 183 - -
Aed1g1983 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Aed1g1983 183 MobiDBLite consensus disorder prediction 1 28 - -
Aed1g1983 183 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Aed1g1983 183 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1983 Aed-Chr1 16815021 16815572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1983 52 160 C2H2 Transcription Factor Family AT1G66140 35.000 1.63e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1983 - - gmx:100811125 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1983 1 16815021 16815572 Aed1g1983 1 16815021 16815572 ECH