Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1974 ATGTTCCAGCATTTGCGTAACTCTATTATAGTTTCACTTCATGGCTCCTCTCCTTGCAGAACCAGGTTCAGAAGTACCACTCCCACGTTGCTCCGTCACAATGTATTGACACGTGCTCAAGATAAGGCCAGGGCTCCTACATCTTCTTCGTTTCAGCCTCAACAAAGTTCACGCCAACAGTTCCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGTCATCATATGTGAAGAATATCTAGGCATCAATAAAAGCGGTGTGGGACTGTTAATGGCTGTAAGCTTATGGGTGATACGAAGTATTGGGGCTCCATCAACATATATAGCTGTTCCAGAGCTAAGACATGCATCTGCAGAAGTCAGTGAATTAGTTTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCATGGATTTAAGCTGGTTACAGACAATATAACAACCAGAAACCGACGCCTTCTCCTATGGGTGATTGGATTTGTTACATTCTTTCTCAGTTCAGTTCTAGACAGCCTGGCATCCACCATAGTCATGATTTCTCTGCTGCGGAAATTAGTACGTCTGTCAGAGTATCAGAAGATATTGGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGAGTCCTATTGGTGCTGTTACCACTACTATGCTGTGGATACATGGTCAAATATCTGCAGTGCAAACAATGAAGGGTTTGTTTTTACCTTCAGTCGTTTCTCTAGTTGTTCCTCTGGTTCTGATGTCCTTCACTAGTGGAGTGAATGGGAAGGAACAAAAACATCCCAATGTCTTTGCCGCTGAAAAGATTGCTCCTCGAGGGAAGCTTGTTTTCTTAGTGAGTTTAGGAGCTTTGATTTTTGTCCCAGTGTTCAGGTCACTCACAGGTTTACCTCCATTCATTGGAATGCTGCTCGGACTTGGCATGCTTTGGATCCTCACTGATGCTATCCATTATGGTGAATCTGAAAGGCATATGCTAAAAGTGCCACATGCTCTGTCAAGGATAGACACTCAAGGAGTACTATTTTTCTTGGGAATTCTATTATCCGTTAGCAGCTTGGAGGCAGCAGGGGTTCTTGGGGAAATAGCAAATTACTTTGATGCACATGTGCCAAGTAGTGAACTGATTGCAAGTGCTGTTGGACTCATATCTGCAGTAATAGACAATGTTCCACTGGTTGCAGCCACAATGGGAATGTATGATGTATCTTATTTCCCTAAAGATTCTGAGTTCTGGCAATTGATTGCATTGTGTGCTAGTACTGGCGGATCCATATTGATTATTGGCTCAGCTGCTGGAGTTGCGTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACATACGGAAGGTTAGTGGCTTTGCCTTAGCAGGTTATGCTGCTGGTATTGCTGCCTATTTAGCGCTTCATAATCTAAACATCTTCTAA 1458 0.4307 MFQHLRNSIIVSLHGSSPCRTRFRSTTPTLLRHNVLTRAQDKARAPTSSSFQPQQSSRQQFQDLAMALLFVIGYAVIICEEYLGINKSGVGLLMAVSLWVIRSIGAPSTYIAVPELRHASAEVSELVFFLLGAMTIVEIVDAHHGFKLVTDNITTRNRRLLLWVIGFVTFFLSSVLDSLASTIVMISLLRKLVRLSEYQKILGAVVVIAANAGGAWSPIGAVTTTMLWIHGQISAVQTMKGLFLPSVVSLVVPLVLMSFTSGVNGKEQKHPNVFAAEKIAPRGKLVFLVSLGALIFVPVFRSLTGLPPFIGMLLGLGMLWILTDAIHYGESERHMLKVPHALSRIDTQGVLFFLGILLSVSSLEAAGVLGEIANYFDAHVPSSELIASAVGLISAVIDNVPLVAATMGMYDVSYFPKDSEFWQLIALCASTGGSILIIGSAAGVAFMGMEKVDFFWYIRKVSGFALAGYAAGIAAYLALHNLNIF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1974 485 Pfam Citrate transporter 74 428 IPR004680 GO:0016021|GO:0055085
Aed1g1974 485 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 45 484 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1974 Aed-Chr1 16762361 16765528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1974 62 483 Antiporters AT3G19490 80.095 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1974 - - gsj:114401198 709.909