Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1971 ATGAGACTTAACTCTCAGAATCTCCATTTGTGGTGGAGACTCTCAATATCCTGCCTTCTTCTTCTACTTGTTCAATCTGTCACATCTCAGTTTGTTACACCTCTTAACTACGATGGGATTCACTTGCTTAAATTCAAATACTCCATCCTCAGCGACCCGTTATCAGTCTTTGAGAGCTGGAACTACGATGATGCAACACCATGTTCATGGCGTGGTGTTACATGCAGTGAAATTGGAGCCCCTGGTACCCCTGACTTTTTCAGAGTAACTAGCTTGGCACTTCCCAATAGCCAACTTTTGGGTTCCATTTCTGAAGACTTAGGCTTGATCCAATACCTTCGCCACGTCGATCTCTCCAACAACTTCCTCAATGGCTCTCTACCAAACACCATCTTCAACTCTTCTCAAATTCAAGTGCTTTCCCTCTCAAACAACGTTATCTCAGGTGAACTACCTGAGCTAATTGGTAAAATGACAAACCTTAAACTTCTCAACCTCTCAGACAATGCTTTTGCCGGGTTGATCCCACAAAATCTCTCTAATTTACCAAACTTAACCGTTGTTTCTTTGAAAAGTAACTACTTTTCTGGCAGTGTCCCAACCGGGTTCAACTATGTGGAGATTCTGGATCTGTCCTCCAATTTGCTCAACGGTTCTTTGCCAAATGAGTTTGGCGGCGGCAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATTTCGGGAACAATACCACCGGCATTCGCGAAACAGATTCCTGCTAACACAACGTTGGATCTCTCATTCAACAATCTGACAGGACCAATACCAGGGTCCGACGCTTTGCTCAACCAGAAGACAGAGTCTCTATCAGGAAATGCTGATCTTTGTGGTAAGCCTCTGAAGATTCTTTGCACTGTTCCCTCTACTATGTCCTCTGTTCCACCCAATGTCACCACATCTTCACCAGCCATTGCAGCCATACCAAAAACAATTGACTCAACCCCTTCAACAAACTCAACAGGATCCGCCACCGGTTCTCAGAATGTCTCACCGGGTGGCCTAAAACCTGCCACCATAGCAGCAATTGTGGTAGGAGACTTAGCTGGCATGGCCCTCTTGGCCCTCATCATTCTCTTCATCTACCAACAAAGAAAGAAAAGATATCCAAATCCAAATCCAAAACCAAACACTAATACTAATGCTAACAACAACTCGGAAAAGAAAGAGGAAACAGTTTCAAGACAAGATGCAGAAGCGAGAACCGTAACACATTCACTTCATTGTTCCTGCTTAACAATCAAAGAAGAAGAAACTTCAGAAGCGACAAGCTCCGACAGCGACCTCGAGAGCAATACCGCGGTGGACATCATCGCGGGACAAAACGGGAACCTTCCGAAACACGGCACTCTTGTGACCGTGGACGGGGAAACAAACTTGGAGCTTGAGACTTTGCTTAAGGCTTCAGCGTATATTTTGGGAAACAGCCACGTCAGCATTGTCTACAAGGCGGTGCTCGAGGATGGGAGAGCCTTTGCCGTTAGAAGGATCGGTGAGTGTGGAATTGAGAGAAAGAAGGACTTCGAGAATCAAGTGCGCGCCATTGCAAAGCTTCGCCATCCCAATTTGGTTAAGGTTCGTGGCTTCTGCTGGGGCCAAGAAGATAAACTCTTAATATGTGACTATGTCCCCAATGGCAACCTCGCCACCATAGACCACAGAAGAGGAGCAGGTTCAGGTTCAGGTTCAGGTTCGTCGCCTTTGAACTTGTCGATGGAGGTGAGGTTGAAGATAGCGAAAGGGGTGGCACGAGGATTGGGATTCATTCACGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATCCTGTTAAACACGGAAATGGAACCCATCATAAGCGATTTAGGGCTGGACCGGCTTCTCTTGATTAATATCAATGACGTAACCAACAGAGCAAACGGTTCGGCCAGGCAATTAATGATGACGAACACGAACCAACAAGACCTGCCATTTGGGTCTAGCCCCTACGCAACGACGGGATCATCGAGTAGTACTGTGGGCCACCTAATGCACTATCAAGCACCGGAGTCACTTCAAAACATCAAACCCACTAACAAGTGGGACGTGTACGCTTTTGGCATCATCTTGTTGGAGCTTCTAACCGGGAGGGTTTTATCGGACCGGGAGTTGGACCAGTGGCATGAACCGGGCGGTTCGGTTGAAGATGAGAAAAACCGGGTCTTGAGGATAGCTGACGTGGCAATGAAGTCTGAAATAGAACAAGGGAGAGAGAATGTGGTATTGACGTGGTTCAAGTTGGGGCTTAGCTGTGTTTCTCATGCCCCACAAAAAAGACCTTCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGCTTCTACTGCTGCTCCATAA 2400 0.4667 MRLNSQNLHLWWRLSISCLLLLLVQSVTSQFVTPLNYDGIHLLKFKYSILSDPLSVFESWNYDDATPCSWRGVTCSEIGAPGTPDFFRVTSLALPNSQLLGSISEDLGLIQYLRHVDLSNNFLNGSLPNTIFNSSQIQVLSLSNNVISGELPELIGKMTNLKLLNLSDNAFAGLIPQNLSNLPNLTVVSLKSNYFSGSVPTGFNYVEILDLSSNLLNGSLPNEFGGGSLRYLNLSYNKISGTIPPAFAKQIPANTTLDLSFNNLTGPIPGSDALLNQKTESLSGNADLCGKPLKILCTVPSTMSSVPPNVTTSSPAIAAIPKTIDSTPSTNSTGSATGSQNVSPGGLKPATIAAIVVGDLAGMALLALIILFIYQQRKKRYPNPNPKPNTNTNANNNSEKKEETVSRQDAEARTVTHSLHCSCLTIKEEETSEATSSDSDLESNTAVDIIAGQNGNLPKHGTLVTVDGETNLELETLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGECGIERKKDFENQVRAIAKLRHPNLVKVRGFCWGQEDKLLICDYVPNGNLATIDHRRGAGSGSGSGSSPLNLSMEVRLKIAKGVARGLGFIHEKKHVHGNVKPSNILLNTEMEPIISDLGLDRLLLININDVTNRANGSARQLMMTNTNQQDLPFGSSPYATTGSSSSTVGHLMHYQAPESLQNIKPTNKWDVYAFGIILLELLTGRVLSDRELDQWHEPGGSVEDEKNRVLRIADVAMKSEIEQGRENVVLTWFKLGLSCVSHAPQKRPSMKEALQILDKIPASTAAP 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1971 799 CDD TM_EGFR-like 351 380 - -
Aed1g1971 799 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Aed1g1971 799 PANTHER OS04G0122200 PROTEIN 30 795 - -
Aed1g1971 799 Gene3D Phosphorylase Kinase; domain 1 463 554 - -
Aed1g1971 799 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 30 795 - -
Aed1g1971 799 ProSiteProfiles Protein kinase domain profile. 479 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1971 799 Gene3D Ribonuclease Inhibitor 36 204 IPR032675 -
Aed1g1971 799 Gene3D Ribonuclease Inhibitor 205 299 IPR032675 -
Aed1g1971 799 SUPERFAMILY Protein kinase-like (PK-like) 484 792 IPR011009 -
Aed1g1971 799 MobiDBLite consensus disorder prediction 380 413 - -
Aed1g1971 799 MobiDBLite consensus disorder prediction 382 399 - -
Aed1g1971 799 Gene3D Transferase(Phosphotransferase) domain 1 556 798 - -
Aed1g1971 799 Pfam Leucine Rich Repeat 228 248 IPR001611 GO:0005515
Aed1g1971 799 Pfam Leucine Rich Repeat 113 131 IPR001611 GO:0005515
Aed1g1971 799 SUPERFAMILY L domain-like 40 295 - -
Aed1g1971 799 MobiDBLite consensus disorder prediction 322 344 - -
Aed1g1971 799 Pfam Protein kinase domain 484 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1971 Aed-Chr1 16745012 16748434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1971 31 792 Receptor kinase-like Gene Family AT2G15300 50.064 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed1g1971 Pkinase 2.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1971 - - gmx:102667237 1256.89