Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1869 ATGGAAACCCAACAAATTGACTACAACACTAAAACACCAAATCCCACTTCCCCAACGCGCTTGAAGCTCTTCGGCGTCAGCGTGCACCACCAAGACGTCGACATCATGGAAGAAGACGAGCCCACGGTGATGCATGATGACGTGGCAGACTCTGCCACCAAGGCCACTTCCACTTCCCCTTCCCCCTCCGACTCGCCAGACTCCTCCGTCGCCGGTGCCGGACCTCCTTCCTCCGGCGACCGCAAATACGAGTGCCAGTACTGCTGCCGAGAGTTCGCTAATTCACAAGCACTTGGTGGACACCAGAACGCGCACAAGAAAGAGCGTCAGCAGCTCAAGCGAGCGCAGTTACAAGCCTCTCGAAACGCCGCCGTTTCGTTCGTGCGGAACCCCATGATCTCAGCCTTCGCCCCTCCGCCGCACCTTCTGGCTCCGCCGGGGGCCGTGATGGTCCCGGCGACCGCGCCATCGTGGGTGTACGTGCCCCCACGTTCCGCGCCTCCTCCCTTCCACGTTTCAGTGTCGCACGGTTGTGCGTTTCCGTCGGCGCATGGCACCAACGGCTTCAGTAGTAGTAACAGTAATAACAGTAATAACATAACGGGTGTGAAATCAGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGGAGATTCGTCATTAGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCATGCTAGGATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGTGACAGTGGGCCCAAGTTTGATGATGCATGGGGCTTGGACTTGCACCTTAGTCTTGCGCCGGCTGCGCCCTCATCACTCGGCTCGGCTTGA 837 0.5806 METQQIDYNTKTPNPTSPTRLKLFGVSVHHQDVDIMEEDEPTVMHDDVADSATKATSTSPSPSDSPDSSVAGAGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPMISAFAPPPHLLAPPGAVMVPATAPSWVYVPPRSAPPPFHVSVSHGCAFPSAHGTNGFSSSNSNNSNNITGVKSAGAGMFPYVGVVGDSSLALSTVQVQARAHHARIDGPSLSRFSKGDSGPKFDDAWGLDLHLSLAPAAPSSLGSA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1869 278 MobiDBLite consensus disorder prediction 39 78 - -
Aed1g1869 278 Gene3D Classic Zinc Finger 66 130 - -
Aed1g1869 278 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Aed1g1869 278 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Aed1g1869 278 MobiDBLite consensus disorder prediction 1 21 - -
Aed1g1869 278 MobiDBLite consensus disorder prediction 51 72 - -
Aed1g1869 278 PANTHER ZINC FINGER PROTEIN 5 13 272 IPR044299 GO:0010090
Aed1g1869 278 PANTHER ZINC FINGER PROTEIN GIS3 13 272 - -
Aed1g1869 278 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1869 Aed-Chr1 16032341 16033177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1869 4 271 C2H2 Transcription Factor Family AT1G68360 41.522 1.78e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1869 - - gmx:102663095 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1869 1 16032341 16033177 Aed1g1869 1 16032341 16033177 ECH