Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1835 ATGGGTCCTCAAATCAAGAAACCATTCCTTTTCACTCTTGTAACAATACCACTTATTTCAATTACAAAACTCTTGCATTCTTATTTCTCTGCACCCAATCTTTCCATTGCTATTGCCACCATCATTTTTGTTCTAGTCCTATACAAATTTTCCTCATCCTCTAAAAAACACACTTCCACTCTTCCCCCTGGTCCTCTATCTGTTCCTATATTTGGTAACTGGTTACAAGTTGGTAATGACCTTAACCACCGTCTTCTAGCATCAATGTCACAAACCTACGGTCCCGTGTTCCTCTTCAAACTAGGTTCCAAAAACTTGATCGTAGTCTCTGATCCCGAGCTCGCCACCCAAGTTCTCCACGCACAAGGCGTGGAATTCGGGTCTCGCCCACGAAACGTTGTGTTTGATATCTTCACAGGGAATGGGCAAGACATGGTTTTCACAGTCTACGGCGACCACTGGCGCAAAATGCGAAGAATAATGACGCTGCCATTCTTCACCAACAAGGTTGTCCACAACTACAGCAACATGTGGGAGGAGGAGATGGACTTGGTGGTGCGCGCCCTCAACGTGAATGAGAGAGTGAGGAGCGAAGGAATAGTTATCAGAAAACGGCTTCAGTTGATGCTGTACAATATCATGTACAGGATGATGTTTGACGCCAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTCAAGCCACCAGGTTTAACTCTGAGAGAAGCCGTTTGGCGCAGAGTTTTGAATACAATTACGGGGATTTTATTCCATTGCTCAGGCCATTCTTGAGGGGATACCTCAACAAGTGCAAGGACTTGCAGTCTAGGAGACTCGCATTCTTCAACACCCACTACGTTCAGAAAAGAAGAGAAATAATGGCTGCTAATGGGGAGAAGCACAAGATAAACTGCGCAATGGATCACATCATAGATGCTGAGATGAAGGGAGAAATCAGCGAAGAGAATGTGATCTACATAGTAGAAAACATCAACGTTGCGGCAATTGAGACAACGCTATGGTCCATGGAGTGGGCAATAGCAGAGTTGGTGAACCATCCAACAGTTCAAAGCAAGATTCGTGAAGAGATATCAGAAGTGCTTAAAGGGAAGGCACTAACAGAATCCAACCTACACGAGCTACCATACTTGCAAGCCACGGTGAAAGAGACACTGAGACTTCACACTCCAATTCCTCTTCTGGTGCCCCACATGAATCTGGAAGAAGCAAAGCTAGGAGGATACACTATTCCAAAAGAGTCAAAAGTGGTGGTGAATGCTTGGTGGCTTGCCAACAACCCCTCGTGGTGGAAGAACCCAGAGGAGTTCAGGCCAGAAAGGTTCTTGGAAGAGGAATGTGCAACGGATGCAGTTGCAGGAGGAAAGGTTGATTTTAGGTTCGTGCCATTTGGTGTTGGAAGGAGGAGTTGCCCTGGGATCATTCTTGCATTGCCAATACTGGGACTTGTGATTGCAAAGTTGGTGACAAGTTTTCAGATGAGTGCTCCAGAAGGAACAAGGATTGATGTGAGTGAAAAAGGAGGGCAATTCAGCTTGCACATTGCCAACCACTCTACCGTGTTGTTCCATCCAATTAATTAA 1599 0.4534 MGPQIKKPFLFTLVTIPLISITKLLHSYFSAPNLSIAIATIIFVLVLYKFSSSSKKHTSTLPPGPLSVPIFGNWLQVGNDLNHRLLASMSQTYGPVFLFKLGSKNLIVVSDPELATQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLVVRALNVNERVRSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNTHYVQKRREIMAANGEKHKINCAMDHIIDAEMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQSKIREEISEVLKGKALTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPSWWKNPEEFRPERFLEEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVTSFQMSAPEGTRIDVSEKGGQFSLHIANHSTVLFHPIN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1835 532 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 5 531 - -
Aed1g1835 532 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 SUPERFAMILY Cytochrome P450 62 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 PANTHER OS02G0467000 PROTEIN 5 531 - -
Aed1g1835 532 Pfam Cytochrome P450 62 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1835 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Aed1g1835 532 Gene3D Cytochrome P450 46 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1835 Aed-Chr1 15722829 15725047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1835 71 532 Monolignol Biosynthesis Gene Families AT2G30490 63.871 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1835 K00487 - gmx:100812188 997.267