Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1824 ATGGCAGCAGGTTCCTCTGTAGGCATTAATGGCTGGGGAGACATCAAGAGTCTCACCGTCCAAGTAATCACCGGTCGATGGTTCGTGGTGTTTGCTTCCTTTCTAATCATGGCAGCCGCTGGAGCCACCTACATGTTCGGTCTCTACTCCAGCGACATCAAAACCACCCTCGGTTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAAGACTTGGGCACCAACGTTGGTGTCCTCTCAGGCCTAATCAACGAGCTCACTCCACCCTGGTGTATACGGTATACACACTGGAAAACTGAAAGGGTAGCCGAACAAAGTTGGTCCCACGTTGACTTATTTGTTTTCAAGTGGAATACTCCTACCGTCCAACCTCATCAGTCATCGCCGGTCTATGCTTTTGGTGCCAAATTTGTTTTATCCGCAGAATAA 432 0.4884 MAAGSSVGINGWGDIKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSSDIKTTLGYDQTTLNLLSFFKDLGTNVGVLSGLINELTPPWCIRYTHWKTERVAEQSWSHVDLFVFKWNTPTVQPHQSSPVYAFGAKFVLSAE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1824 143 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 93 - -
Aed1g1824 143 Pfam Nodulin-like 26 93 IPR010658 -
Aed1g1824 143 PANTHER MFS TRANSPORTER 8 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1824 Aed-Chr1 15656430 15659957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1824 13 115 Nodulin-like Gene Family AT2G39210 58.621 7.38e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1824 - - gmx:732549 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1824 1 15656430 15659957 Aed1g1824 1 15656430 15659957 ECH