Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1820 ATGGGAAAGAAATCTTTGAAGTTACCCTCTCTTTTCAAAACCAAAGAAACACCAAGAAAGCATCATCATCCTAATCATCCATGGCAATTGATGCCATCTTGTGGCCACTCAAAGACTCTATCTTTCAGAGGTGATGACATGTTCAAGACAGTTAACTCTGTGTTCTTCGACCCTTCAGCTGAGAGCACTATTGAAACTCCCAAGTCATGGTTCACAACCTCGTCTGAATCTGCAGCAAGCATCTCAACCGAGTCAGAAGACTACAACTACTGTGATGGAGAATCTTTGGAGATGTTGGTGCGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAACCAGGTGACACAAGTTCCATTTTGGAGAAGGCCAAGGCTAGTGGCTTTCCCTTTAAAGAGAGTGTGGTCTTGGCCATGGAGTCAGAGGACCCTTATGAGGACTTCAAGAGATCAATGGAGGAGATGGTTGAGTCACATGGTGTGAGGGATTGGGAAGGCTTGGAGGAGCTTCTAACTTGGTATTTAAGGGTGAATGGTAGAAATAATCATGGGTTTATAGTGGGTGCTTTTGTTGATTTACTCTTTAGTTTAGCAGCTTCTTCTAATGGCTCCAACACTTGTTCTGATTCAACTTCGTATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCCCCCTTCAGTGCCCGGAATGAGATTGTTGAGCATGGGATTGGGAATCAAAATGATGATGCTGTAACATCATAG 735 0.4354 MGKKSLKLPSLFKTKETPRKHHHPNHPWQLMPSCGHSKTLSFRGDDMFKTVNSVFFDPSAESTIETPKSWFTTSSESAASISTESEDYNYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGRNNHGFIVGAFVDLLFSLAASSNGSNTCSDSTSYSSAVSSFASSPFSARNEIVEHGIGNQNDDAVTS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1820 244 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 133 196 IPR006458 -
Aed1g1820 244 MobiDBLite consensus disorder prediction 1 27 - -
Aed1g1820 244 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 223 IPR038933 GO:0045892
Aed1g1820 244 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 223 - -
Aed1g1820 244 ProSiteProfiles OVATE domain profile. 135 194 IPR006458 -
Aed1g1820 244 Pfam Transcriptional repressor, ovate 139 195 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1820 Aed-Chr1 15616843 15617577 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed1g1820 Ovate 4.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1820 - - gmx:102668773 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0578 8 4971598 4972428 Aed1g1820 1 15616843 15617577 ECH
Aed2g2019 2 24629797 24630585 Aed1g1820 1 15616843 15617577 ECH
Aed1g1820 1 15616843 15617577 Aed1g1820 1 15616843 15617577 ECH