Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1811 ATGACGAGCCACAGCGAAGCAGAGCGCGGGAAGTTAAAAAGAGGTCTCTTAAGAAGAAAACGCGCGTTTCAGCTTGACTTGAGTAGCGGAATAGAGGAGAATGGGATCCCAAATTCTTCCAAAATGGGCATCGAAACCCTGCGGCCTATGGTCTACGGTTGCTTATACTGTGCTCAGTCATATCTCAAGACCCTAGCTACTTTGAGTTTTGCAGATTCCAAGACACTTAAGGAAGACAAGAGAGAAGAATTGTTTGAAACTTTAAAACTAAATGATTCTATTGGATGGGATGTTGATGTCATTGACCCACGGGAACTCTCCGCTAAAATGCTTAAGAAGAATAAGACTAACTTGAATGAGATTTCACATAGCTCTGCCATGGGCCTCATTGATAGGGTACTCAAATTGGGAGTGCTTCTAACTGAGGTTTATATAGATACAGTTGGAGATCCAGGGAAATATGAAACGAAGCTGTCTAATAGTTTCCCGTCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGCCTTTATCCTGTTGTCAGTGGTGCAAGTATAGTTGCAAAGGTCACAAGGGACCAAGCTTTAAGAGAATGGGTGCTTGATGAGACTGCTGAAAACTTGCAGAGGAACTTTGGCTCTGGATATCCTGGAGATCCCCAAACCAAGTCCTGGCTACAGAATCACAAACATCATATCTTTGGATTTCCAACATTGGTCCGATTTAGTTGGGGAACCTGCAACACTTATTTTAAAGATGCTGCAGAAGTGTTATGGGAGTCTGACAATTTGGATGAAGACGGTGGTGGAAGCAATAATAAGAATGGCAAGCGACAATTGAAATTAAGCAATGTGGGTTTCACAACATCCAAGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGACGCAGTAGGTTTTTTCAGGCTCGGAAACTTGAGCACCTCACTAGTTTCTAA 954 0.4224 MTSHSEAERGKLKRGLLRRKRAFQLDLSSGIEENGIPNSSKMGIETLRPMVYGCLYCAQSYLKTLATLSFADSKTLKEDKREELFETLKLNDSIGWDVDVIDPRELSAKMLKKNKTNLNEISHSSAMGLIDRVLKLGVLLTEVYIDTVGDPGKYETKLSNSFPSIKFVVAKKADSLYPVVSGASIVAKVTRDQALREWVLDETAENLQRNFGSGYPGDPQTKSWLQNHKHHIFGFPTLVRFSWGTCNTYFKDAAEVLWESDNLDEDGGGSNNKNGKRQLKLSNVGFTTSKRSEEIESSGKGRSRFFQARKLEHLTSF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1811 317 Gene3D - 44 205 IPR036397 GO:0003676
Aed1g1811 317 SUPERFAMILY Ribonuclease H-like 49 251 IPR012337 -
Aed1g1811 317 TIGRFAM TIGR00729: ribonuclease HII 47 248 IPR004649 GO:0004523|GO:0016070
Aed1g1811 317 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 33 255 IPR024567 GO:0004523
Aed1g1811 317 CDD RNase_HII_eukaryota_like 42 255 - -
Aed1g1811 317 Pfam Ribonuclease HII 49 246 IPR024567 GO:0004523
Aed1g1811 317 Gene3D Ribonuclease hii. Domain 2 206 255 IPR023160 GO:0004523
Aed1g1811 317 PANTHER RIBONUCLEASE H2 SUBUNIT A 46 315 IPR001352 GO:0003723|GO:0004523
Aed1g1811 317 PANTHER RIBONUCLEASE 46 315 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1811 42 317 Core DNA Replication Machinery Family AT2G25100 63.604 2.19e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1811 K10743 - gmx:100779875 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1811 1 15534287 15536939 Aed1g1811 1 15534287 15536939 ECH