Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1809 AAAAAAAAAAAAAAAAAATCGAGTAAAACTGTTTTCCCGCCAAAGAAAAAAAAATTTAAGGTTCCCGCTCAGTTCCTTTTTTTTTTTCGCGCTCTCTCTCTCTCTCTCTCTCCATATCAAAAGTGCAGTGACTGGTCACAGAAACTCTTTGTCAAACTACGCAAACGCAAAGGGTTTCTTCTGAATCATTCAAAGGCCATGGATCTGTCAAATCCTGCTGTATTTGTAAATGCTCAGTTGATTCCCAACTTTATAGGGAAGAAAGTAAGAGCAGTGGTTCAGGTGAATCAGTGTGATGGTGGGGTTGTCACAGCGAAATCCAGTGATGACTGTCAATTAACCATAAAAGGGTTGCCACAAGAAGTCCCTCTTATGAATTATATTGAGGTCATTGGCATTGCTGAAAGTAGCAACTCTATTGATGCTGAAATATGGACGGACTTTGGCAACACATTTGATACCAACTCTTACAATCAGTTGTGCCAACTAGCAAATGGTGAATTCAAAGGTCTGTTTCTCTAA 522 0.3908 KKKKKKSSKTVFPPKKKKFKVPAQFLFFFRALSLSLSPYQKCSDWSQKLFVKLRKRKGFLLNHSKAMDLSNPAVFVNAQLIPNFIGKKVRAVVQVNQCDGGVVTAKSSDDCQLTIKGLPQEVPLMNYIEVIGIAESSNSIDAEIWTDFGNTFDTNSYNQLCQLANGEFKGLFL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1809 173 CDD RPA3 72 172 - -
Aed1g1809 173 Pfam Replication factor A protein 3 71 166 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aed1g1809 173 Gene3D - 69 173 IPR012340 -
Aed1g1809 173 SUPERFAMILY Nucleic acid-binding proteins 72 172 IPR012340 -
Aed1g1809 173 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 67 173 - -
Aed1g1809 173 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 67 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1809 Aed-Chr1 15529251 15530696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1809 67 173 Core DNA Replication Machinery Family AT3G52630 57.944 2.97e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1809 K10740 - gmx:100781484 197.208