Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1793 ATGGAGCTTACAGCTTTCCCGAGCTTCAAAGCAGTTTCTAATGCTTCCACATTCCCATTTTCTTCGAATCAACTTTGGTGCCGATGCTCTCTTCGTCTTCGTCGACGCGATTATGGCCTCTGCTGGAGTCCCAAGTCAAAACCGTTTGTTCGGATCAGGATGTGCTCGGAGAATGCTTCCTCGTCGAACGGTTATGGCGGAATCGAAAGCGGAGAAACGAACTCTGATTTCGTCGAAGTCATTGGCATTGGCTCTAGGAAGGACGCTGTTTTTGATTTCTGCCTGAATTCGCCGTTTCAATCACCGTCGCTGCGGTTTTGGAATATCCTTATGAAAGAATCAGAAGAGGTGCAATTACAGCAAAAATCAGTTGAAGAAGAATCTCACCCAAGATTTGTCAAAGCTCCAGTATTTTTGAAGTCATGTTCAAAGACTATTGTCCTTGTTTGCACATTCCTTACCTTCAAACTCTTGTATTTCATTTTCATCCATGGGTTTACAAGTGGTCTGGTTTGCATTATTATGATATTATCCCTTTCAGCTGATGATTTTGTGGCCAGTGCAGGATATGGCTTGTACCACACTGTTGCAGCAGATATTTTTGAAACTGTAAGGTCCAGGAATGGATTAACAGTTGCTATAGTTTTGAAGCCATTCAGATTTGAAGGGCTAAGACGACAAGATGAGGTGAAAGCCTTGATGCAGAAACTTAAGGAAAACACAAATCTACTTATTGAAATTGATATCGATGCACTGCTCGAGAAAGACTTGTTGACTCTAGATGAGGGAATGAAGACTGCTAATGATGCAGTTTTGCTGGCTATTAAGGCTGTTTCTGTTCTAAAATCTGAGATGCACAGAAAATTTATAGATAGATTGAATGATGGCATGAAAGAGGCCAGCTCTTCAGAAATTAATAAAATATTGGAATCCTATAAAGAAGCAGGGATTGGATTTGGAGCTGCATATAACATCAAAGCTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGTGCTCGTTTGAAGGATCCAAATAGCATAGTTATATGCACTCTTGCGTGTTCAAAACCCATCAACGATAGTGATGTAGCAATCTTTCTGTGTACTTTCCGTCAAACAACAGAATACCCAAGGGATATTATAATATCAACAATACATGACCCTACCATTAAGCCCAACCTACTCATAACAACAGTTCTTACACTTGGCTGTTTAAATGTGCAACGGTCTTCCCAAAATGGTGGTATACTGTCCAGACTTGCCATGCATTTTCCCCTTATTTTTAGCTTTTGGGGAAGACATAATCAGCAACAAGTTGGCCCTGGGACTGGGAAACAGACTGAAGTATTTCCTCAAGAAGTGATGAGTTCTGATGACATTGATGAGAGGACAAATAGGACTGCTTCTGACGACATAGATAACAATCTTAACAAATATTATGAAGAGTTGAAGCCAGCAATGAGCAACAACAGCTCGAAGTTGCCTATTTCAAGGGATTCTGGAAAAAATGAAGATTTATCTGACACCATGTCTAACTATAATATCCTTTATGACTCTCTTTCTGAAGGAGTTGCATTAGGTGACTCTGCTTTTCAAAGGGAGCAACTTGAGAACTGGAATCTAGGTCCTGGATTTGAGGTGGCAAAGGAGTGGGCCCAAGAAAAAGCAGCTGATGCTACACCCATTGTTGATAACCTCGGCATCTTCCACCTTCCTGTTGGTGTGCGGCATTCAGAAGAGTTGAAAGACTGTTTGGAAATCTCATTTCTGACAAAACAGCTTGAGCCAGATACTGACAACGATGTGAAAACACAAACATTAAATGGAGGTATTTCTCCTTGGAGTGCAGCGACTGATGCAAGTTTGGAAGCAGTCATGGAATTTGCATCTTCACTTTTGAAAGGAAAGGATGCTAATAAATCAAAGAAAGACAGAGTTCTATCTGTTCGTGCTGCATCTATGTTGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAGTCCGGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGTCTTGTTCTGAGAGATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTCCAGGTACATTCTATTTCAATAACGGAGATATGTTTCAAGGATCATGGAGGGACGATGTCATACACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCTAATGGTGAGGGACGGTTCTACACAAAGTCCGGTGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGACATGGCCAGTTTCTTTGTATTAATGCAAATGGAACAAGGTACACTGAAATTTGGGAACATGGTGTTCTTGTTGATAGCAAGCATTTAGACAGATGA 2439 0.4141 MELTAFPSFKAVSNASTFPFSSNQLWCRCSLRLRRRDYGLCWSPKSKPFVRIRMCSENASSSNGYGGIESGETNSDFVEVIGIGSRKDAVFDFCLNSPFQSPSLRFWNILMKESEEVQLQQKSVEEESHPRFVKAPVFLKSCSKTIVLVCTFLTFKLLYFIFIHGFTSGLVCIIMILSLSADDFVASAGYGLYHTVAADIFETVRSRNGLTVAIVLKPFRFEGLRRQDEVKALMQKLKENTNLLIEIDIDALLEKDLLTLDEGMKTANDAVLLAIKAVSVLKSEMHRKFIDRLNDGMKEASSSEINKILESYKEAGIGFGAAYNIKASILQSIFDSPFLGARLKDPNSIVICTLACSKPINDSDVAIFLCTFRQTTEYPRDIIISTIHDPTIKPNLLITTVLTLGCLNVQRSSQNGGILSRLAMHFPLIFSFWGRHNQQQVGPGTGKQTEVFPQEVMSSDDIDERTNRTASDDIDNNLNKYYEELKPAMSNNSSKLPISRDSGKNEDLSDTMSNYNILYDSLSEGVALGDSAFQREQLENWNLGPGFEVAKEWAQEKAADATPIVDNLGIFHLPVGVRHSEELKDCLEISFLTKQLEPDTDNDVKTQTLNGGISPWSAATDASLEAVMEFASSLLKGKDANKSKKDRVLSVRAASMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLRDGSIYDGLWRYGKRSGPGTFYFNNGDMFQGSWRDDVIHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYTEIWEHGVLVDSKHLDR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1793 812 SUPERFAMILY Tubulin nucleotide-binding domain-like 185 279 IPR036525 -
Aed1g1793 812 Gene3D - 750 810 - -
Aed1g1793 812 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 1 812 - -
Aed1g1793 812 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 677 805 - -
Aed1g1793 812 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 1 812 - -
Aed1g1793 812 Gene3D Tubulin/FtsZ, GTPase domain 184 404 IPR036525 -
Aed1g1793 812 SMART morn 701 722 IPR003409 -
Aed1g1793 812 SMART morn 724 745 IPR003409 -
Aed1g1793 812 SMART morn 678 699 IPR003409 -
Aed1g1793 812 SMART morn 770 791 IPR003409 -
Aed1g1793 812 Gene3D - 678 737 - -
Aed1g1793 812 PRINTS Cell division protein FtsZ signature 209 230 IPR003008 GO:0005525
Aed1g1793 812 PRINTS Cell division protein FtsZ signature 303 324 IPR003008 GO:0005525
Aed1g1793 812 Pfam MORN repeat 685 701 IPR003409 -
Aed1g1793 812 Pfam MORN repeat 773 784 IPR003409 -
Aed1g1793 812 Pfam MORN repeat 703 725 IPR003409 -
Aed1g1793 812 Pfam MORN repeat 726 748 IPR003409 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1793 1 811 PP2C-type Phosphatase Gene Family AT1G75010 43.187 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1793 - - gsj:114371951 1395.56