Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1769 ATGTTATCGGGGTTGATGAACTTATTGAGGGCCTGCTTTCGGCCGGGTTCGGATGGATTTACGCGTGCAGGTTCAGATGCTGGAGGTAGACAGGATGGACTATTGTGGTACAAGGACTCGGGACAACACTTGAATGGTGATTTTTCAATGGCTGTAATCCAAGCCAATAACTTGTTGGAAGATCAGAGCCAGATTGAATCAGGCTGTTTGAGCTCCAATGAATCTGGCCCTTATGGTACCTTCATCGGTATCTATGATGGCCATGGAGGGCCTGAGACATCGCGGTTTATCAATGATCACCTATTTCACCATCTCAAGAGATTTACTTCTGAGCAACAATCAATGTCGGTAGATGTAATTCGCAAAGCACTCCAAGCAACAGAAGAGGGGTTTATTTCAGTGGTTGCCAGACAGTTCTCTCTGTCACCACAAATTGCTGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCAAACCTTGGGGATTCCCGGGCAGTTTTGGGAAGAGCAGTCAAGGCAACTGGTGAGGTTTTAGCCATGCAATTATCAGCAGAGCACAATGCATCGATAGAGTCTGTAAGACAGGAGCTGCATGCTTCACATCCTGATGACCCAAATGTTGTGGTTTTAAAGCATAATGTGTGGCGTGTGAAGGGTCTTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAACCACTATATGCTAAGTTTCGTCTTCGTGGATCATTCACAATGCCAATACTAAGTTCAGAACCATCGATATCAGTGCATCATTTGCAACCAAATGATCAGTTTATTATATTTGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGTCCCCGCAGTGGAAGCGCTAGGAGGCTGGTAAAAGCTGCACTTCAAGAAGCCGCAAAGAAGAGAGAAATGAGATATTCGGATTTAAAGAAAATTGATCGTGGAGTTCGTCGTCATTTCCATGATGATACCACTGTGGTTGTTGTGTATCTTGACTCAAATCTCGTGAGCAGGGCAAGCACTGTGAAGTTTCCTGGTATTTCTGTTAGAGGGGGTGGTATTAACCTGCCTCATAACACACTGGCACCTTGTACCACACCAACAGAGATTGGTGGTACCTGA 1194 0.4405 MLSGLMNLLRACFRPGSDGFTRAGSDAGGRQDGLLWYKDSGQHLNGDFSMAVIQANNLLEDQSQIESGCLSSNESGPYGTFIGIYDGHGGPETSRFINDHLFHHLKRFTSEQQSMSVDVIRKALQATEEGFISVVARQFSLSPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIESVRQELHASHPDDPNVVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLRGSFTMPILSSEPSISVHHLQPNDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVVVVYLDSNLVSRASTVKFPGISVRGGGINLPHNTLAPCTTPTEIGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1769 397 PANTHER ALPHABET, ISOFORM E-RELATED 6 387 - -
Aed1g1769 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Aed1g1769 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Aed1g1769 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Aed1g1769 397 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Aed1g1769 397 SMART PP2C_4 39 353 IPR001932 -
Aed1g1769 397 CDD PP2Cc 48 355 IPR001932 -
Aed1g1769 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 6 387 - -
Aed1g1769 397 Gene3D - 37 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1769 Aed-Chr1 15200527 15204835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1769 1 393 PP2C-type Phosphatase Gene Family AT4G38520 75.827 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1769 - K01102 gmx:100794801 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1769 1 15200527 15204835 Aed1g1769 1 15200527 15204835 ECH