Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1752 ATGCAATCTATCAGGAAGTCCTTCAAATCTTATGGTTCCAATCACACCAGACGTTCAAGGTTTTCCGGCGCCGGAAACACCACCGATTCCGACCACGAGCAGCTACCCATTCTCCACGACCAAGAAACCCACCGCAACAACACCGCCATGCCCGCCGGCGACTACGTCGTCAAGATCAACGATGACCCCTCTCAGTCTCAGGGCAACAGGATTTGGCGCGAGTCTAGCTACGAATTCTGGAACACCGACGGCGCCACCCCCGCTTCCGTAGCCGGCAGCAACGATAGCTTCGATTTCCGGCAGACGGAGGACCCGCCGTCGCAGCTGATCGGTCGGTTTCTCCACAAGCAGAAAGCCTCCGGCGAGATGCAGCTTGACATGGATTTGGAAATGGAGGAGCTACAAAACGAAGCCGACGACGGAAAGTTAACGCCGGTGGATGAATCTCCGGTGACTCACCGCGCCTCGAGGGAGCTGAAGGTCTCCTTCGACGAACCCCATTCCACTTTGAGTTTTCTCGAAGCGCAAAACGACGCCGTCCGAAGAAGGCACAGCAAGGACTATTCGTCCATCGCAGACTTCCAACGCCCTCCGCAGCCGCCGCAATACGAGCGTCGCTGCTCTCCCACTCCGTCGCCACCCTCCGCCGACGAGGTTGTTCGCTGCACCTCGAACGCTTCCTTCGAGAGAAACCTCTCCATGCAGAGAAAATCTGCGTTGTTGAAGGCCAAAACGAGGTCCAGGTTGATGGACCCGCCAGAAGATCCCGAAAGGAAATCGAGTCGGGTCCTCAGATCGGGTCAGATGATGTCCGGGTTTATAGGGAGGAAGAATGACGACGACGAAGACGATCCCTTTTTGGAAGAGGATCTTCCTGATGAGTTCAAGAAGACTCATTTCAGCTTTTGGATTCTTCTTGAGTGGGTTAGTTTGATTTTGATCATTGGGTTGTTGATAACCACCCTCTGTATTCCCATTCTGAGGTACAAGGATCTGTGGCAGCTTAGGTTGTGGAAATGGGAGGTTATGGTCCTTGTTTTGATCTGTGGCAGGTTGGTCTCTGATTGGGTTATTAGGATTGCCGTGTTCTGCATTGAAAGGAACTTCCTTTTGAGGAAGAGGGTCTTGTATTTTGTCTATGGTGTAAGGAAGGCTGTTCAGAATTGTGTTTGGTTGGGTCTTGTGTTGATTGCGTGGCACTTGTTGTTTGACAAGAGGGTCCAGAGAGAGACACACAGTGATTTCCTAGAGCATGTTACAAAGGTATTGGTTTGTTTCCTTGTGGGGACTCTTGTCTGGTTGTTGAAGACTCTTATGGTTAAGGTCTTGGCCTCTTCTTTCCACGTTAGTACCTACTTTGATAGGATTCAGGAATCGCTGTTTAATCAGTTTGTGATTGAGACGCTTTCGGGGCCGCCGGTGGTGGAGATTCAGAAGGCCGAGGAGGAGGAGGAGAGGCTTGCCGATGAGGTTCAGAAGCTGCAGAATGCTGGGGTTACCATACCCCCTGACCTCAGAGCAACTGCTTTTTCTAATATCAAGAGTGGGAGGTTGAAGAGTGGAATGCTGCCCAAAAGCCCCGGAGTTAAGAGTGCCAAGTTTTCACGGCCCCTTTCCAAGAAGTCCGATGATGTCAATGCCATCACTATGGATAACCTTCATAAGCTCAATCCCAATAATATCTCTGCCTGGAACATGAAAAGGTTGATGAACATGGTCCGCCATGGGGCTCTTTCTACCCTCGATGAACAGATACTTGATAACTCCATTGATGATGAGAATGCCACGCAGATTAGAAGTGAAAACGAGGCAAAAGCTGCAGCTAAGAAAATATTTCACAATGTTGCTAGGCGTGGCTGCAGGTATATACACCCGGATGACTTGATGCGCTTTATGCGGGAAGATGAAGCTGCCAAAACCGTTAATCTTTTTGAAGGAGCGACTGATGCTGGCAGAATCAGCAAATCAGCCTTGAAGAATTGGGTGGTCAATGCCTTCAGGGAAAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACGGCCGTGAACAAACTTCATCGAATGCTCAATTTTATAGTTGCAATTATTATACTGATTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAGTTTCTTCTCTTTGTGAGCTCACAGGTTGTTGTGGTTGCATTTGTATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCTTATTTGTCATGCACCCATTTGACGTGGGAGATAGATGTGACATTGATGGGGTTCAGTTGTTGGTAGAAGAAATGAACATATTGACAACCATATTTCTGAAATATGACAATCAAAAGGTCATCATCCCCAACAGTGTCCTTGCTACCAAGGCCATATATAACTATTACCGGAGTCCTGACATGGGAGATACTATCGAATTCTATATACATATATCTACACCAGTTGAGACGATTTCAGTTATTAAACACAGAATACAAAGTTACATTGAAAACAAGAAGGAGCACTGGTATCCTTCACCTTTAATGGTAATAAGGGATTATGATCAAGCAAACATGGTGAAAATGGCTGTGTGGCCAACTCAGAGAATGAACTTCCAAGACATGGGAGAAAGGTTTGTGAGGAGATCCCTTTTGCTTGAAGAGATGCTAAAGATTTTCAAGGAGCATGACATTAATTATCGTCTGTTGCCCCTGGACATTAACGTGATGGCCACGCCTACCTCTTCTGAACGGCTTCCACCTAGTTGGGCAACATTTCCAACAAGTTGA 2772 0.4744 MQSIRKSFKSYGSNHTRRSRFSGAGNTTDSDHEQLPILHDQETHRNNTAMPAGDYVVKINDDPSQSQGNRIWRESSYEFWNTDGATPASVAGSNDSFDFRQTEDPPSQLIGRFLHKQKASGEMQLDMDLEMEELQNEADDGKLTPVDESPVTHRASRELKVSFDEPHSTLSFLEAQNDAVRRRHSKDYSSIADFQRPPQPPQYERRCSPTPSPPSADEVVRCTSNASFERNLSMQRKSALLKAKTRSRLMDPPEDPERKSSRVLRSGQMMSGFIGRKNDDDEDDPFLEEDLPDEFKKTHFSFWILLEWVSLILIIGLLITTLCIPILRYKDLWQLRLWKWEVMVLVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDKRVQRETHSDFLEHVTKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPVVEIQKAEEEEERLADEVQKLQNAGVTIPPDLRATAFSNIKSGRLKSGMLPKSPGVKSAKFSRPLSKKSDDVNAITMDNLHKLNPNNISAWNMKRLMNMVRHGALSTLDEQILDNSIDDENATQIRSENEAKAAAKKIFHNVARRGCRYIHPDDLMRFMREDEAAKTVNLFEGATDAGRISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIIILIIWLLILELATTKFLLFVSSQVVVVAFVFGNTCKTIFEAIIFLFVMHPFDVGDRCDIDGVQLLVEEMNILTTIFLKYDNQKVIIPNSVLATKAIYNYYRSPDMGDTIEFYIHISTPVETISVIKHRIQSYIENKKEHWYPSPLMVIRDYDQANMVKMAVWPTQRMNFQDMGERFVRRSLLLEEMLKIFKEHDINYRLLPLDINVMATPTSSERLPPSWATFPTS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1752 923 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 910 - -
Aed1g1752 923 MobiDBLite consensus disorder prediction 247 262 - -
Aed1g1752 923 Gene3D - 747 796 IPR023408 -
Aed1g1752 923 PIRSF Memb_At2g17000 14 923 IPR016688 -
Aed1g1752 923 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 910 IPR016688 -
Aed1g1752 923 Coils Coil 477 497 - -
Aed1g1752 923 MobiDBLite consensus disorder prediction 1 50 - -
Aed1g1752 923 MobiDBLite consensus disorder prediction 85 107 - -
Aed1g1752 923 MobiDBLite consensus disorder prediction 85 103 - -
Aed1g1752 923 SUPERFAMILY Sm-like ribonucleoproteins 737 796 IPR010920 -
Aed1g1752 923 Pfam Mechanosensitive ion channel 689 893 IPR006685 GO:0016020|GO:0055085
Aed1g1752 923 MobiDBLite consensus disorder prediction 244 263 - -
Aed1g1752 923 MobiDBLite consensus disorder prediction 179 218 - -
Aed1g1752 923 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1752 Aed-Chr1 15097488 15101750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1752 54 919 Mechanosensitive Ion Channel Family AT1G78610 55.996 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1752 K22048 - gmx:100789882 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1752 1 15097488 15101750 Aed1g1752 1 15097488 15101750 ECH