Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1751 ATGGTGATGATGGTTACGGAGGGAAACGACAGCAGCTGCGGCAGCGGCAGCGGAGTGCAGCACCATAATAATACGACGACGTCGTCCTCGTCCTCGCCGGCGCAGTCCCGGCAACAGCGGCAGAAGCTGGAAGTGTACAATGAGATTCTTCGCCGCTTGAAGGATTCCGGCCACGAAGAAGCTATGCAACCTGGCTTCCACGATCAGCTTTGGGCTCACTTCAATCGCCTTCCTGCACGGTACGCGCTGGATGTGAATGTGGAAAGGGCGGCAGATGTTCTTATGCACAAGAGATTGTTGCATTTGGCGCATGATCCTGCTAATAGGCCTTCAATTGAAGTTCGATTAGTTCAGGTTCATCCCATATCTGATGGAAACTCAGCTGACACTTTTGAATCAGATGATCCTGGGATAGAATCTGGTCAAAGTTCTTCAAAGTACTTAAGCAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCTCTGGCTCTTGAAGCAAATGTTTCTGAAGACATAGAAGAGGAACAATCTGTACATGCCAATGTTCAATATTCACGGCCCATGCATGAAATCACCATCTCAACAGATGACAAGCCCAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAAGCACATGCCTTTTCGACAACTGATGGTTACTCATTAGATGTGTTTGTTGTTGAAGGATGGCCAAATGAGGTTCACTCATCCAGCACTCTGCTTGACTATTTGGTATTTAAACAGGAAACAGAAAAGCTTAAAGAAGCTTTGGAAAGAGAAGTCTTGAAGAAGATTGAGAGACAGGTGAAGTCCAGTCCACAATCTGTATCTTCTGTTGATGAGCCACAGATGAAAAGTGAACTGGATCATTTGAAAATACCAAATGATGGGACAGATGTTTGGGAAATAGATCGTAAACATTTGAAATATGGAACTCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTGTATATTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGGATGTAAATTCAGAATTGCAGAAAGAGTTCGCACAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTGCAATTCATAGGAGCATGTACCAAGCCCCCACGCTTATGTATAGTAACAGAATTTATGTCCGGTGGAAGTGTGTATGACTACCTTCATAAGCAGAAGGGCTTTTTTAAATTTCCTACCCTGCTCAAAGTAGCAATTGATGTTTCTAAAGGAATGAACTACTTGCATCAACATAACATAATCCATAGAGACTTGAAGGCTGCTAACCTTTTGATGGATGAAAATTGTCTTCCATACGAATATTTAACCCCCTTACAGGCAGCTATAGGAGTGGTTCAAAAGGGAAGCGGTTTAAATGGATTTCAGGGTTTACGACCCACCATCCCCAAGAACACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAAGATCCAACATTGAGACCCGATTTCTCCGAAATTATCGAGATTCTCCAGCAGTTAGCAAAGGAGGGTGGAGATGGAGAGGAGCGGCACAAGGATAAATCTGGAGGACTTCTGTCTGTACTCAGACGAGGACATCACTAA 1647 0.4384 MVMMVTEGNDSSCGSGSGVQHHNNTTTSSSSSPAQSRQQRQKLEVYNEILRRLKDSGHEEAMQPGFHDQLWAHFNRLPARYALDVNVERAADVLMHKRLLHLAHDPANRPSIEVRLVQVHPISDGNSADTFESDDPGIESGQSSSKYLSRQSIHPPPAFGSSPNLEALALEANVSEDIEEEQSVHANVQYSRPMHEITISTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPNEVHSSSTLLDYLVFKQETEKLKEALEREVLKKIERQVKSSPQSVSSVDEPQMKSELDHLKIPNDGTDVWEIDRKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKDVNSELQKEFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKAANLLMDENCLPYEYLTPLQAAIGVVQKGSGLNGFQGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIEILQQLAKEGGDGEERHKDKSGGLLSVLRRGHH 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1751 548 MobiDBLite consensus disorder prediction 8 41 - -
Aed1g1751 548 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 26 452 - -
Aed1g1751 548 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 454 529 - -
Aed1g1751 548 Gene3D Transferase(Phosphotransferase) domain 1 394 455 - -
Aed1g1751 548 SUPERFAMILY ACT-like 194 258 IPR045865 -
Aed1g1751 548 Gene3D Phosphorylase Kinase; domain 1 310 393 - -
Aed1g1751 548 CDD STKc_MAP3K-like 328 518 - -
Aed1g1751 548 SMART serkin_6 322 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1751 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Aed1g1751 548 Gene3D Transferase(Phosphotransferase) domain 1 456 536 - -
Aed1g1751 548 Gene3D - 193 282 - -
Aed1g1751 548 MobiDBLite consensus disorder prediction 525 548 - -
Aed1g1751 548 MobiDBLite consensus disorder prediction 1 41 - -
Aed1g1751 548 MobiDBLite consensus disorder prediction 136 158 - -
Aed1g1751 548 MobiDBLite consensus disorder prediction 125 161 - -
Aed1g1751 548 ProSiteProfiles ACT domain profile. 196 292 IPR002912 -
Aed1g1751 548 MobiDBLite consensus disorder prediction 525 541 - -
Aed1g1751 548 ProSiteProfiles Protein kinase domain profile. 322 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1751 548 Coils Coil 261 281 - -
Aed1g1751 548 SUPERFAMILY Protein kinase-like (PK-like) 312 520 IPR011009 -
Aed1g1751 548 Pfam Protein tyrosine and serine/threonine kinase 322 452 IPR001245 GO:0004672|GO:0006468
Aed1g1751 548 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 452 - -
Aed1g1751 548 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 454 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1751 Aed-Chr1 15083760 15092633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1751 3 547 MAP Kinase Kinase Kinase AT4G35780 52.333 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed1g1751 PK_Tyr_Ser-Thr 6.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1751 - - gmx:100805180 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1751 1 15083760 15092633 Aed1g1751 1 15083760 15092633 ECH