Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1749 ATGGCGTGTGGAAGGAAGAAGCGACGAGGGAACACAGCCATTATTCCTGTAGATATTGATGCTGAGTGTGAGGTGAAATTTGCTGAGAACAATGGTGATGGGGCAGGGGCTTCTTCTCCTTCTCCCGTTCAACAAGTTGTGAAAAAGAAGCGTGGCAGAAAAAGTAATAAAGAGAAGGAGGAAATGGAAAAGAAGAAGATGCTAGAGAGCAATTTGTTGGAGAAGGAAGATGCTCAGGACGAAAACCACGGTGAAAATGATCAAGTAGGAGGTTCTTCTTCTGTTCAAGTAAGTGTGAAAAAAAAGCGTGGAAGAAAGAGTAAAAAGGAGAAAGAGGAAATGGATAAGAAGAAGATGTTAGAGGGCAATTTGTCGGAGGAGAAAGATGCCCAAAACGAAAACAATGGTGAAACTGGTGGAGTAGGAGGTTCTTCTTCTGTTCAAGAAGGTGTGGCTAAGAAGCGTGGAAGAAAGGAGGAGGACATGGAAAAGAAGATGTTAGACAGCAATTTGTTGGAGGAGAAAGATGCTCAAAACGAAAACCACGGTGAGAATGGTGGAGTAGGAGGTTCTTCTTCTGTTCAAGGTGTGAAAAAGAAGCCTGGCAGAAAAAGTAATAAGGAGAAGGAGGAAATGAAAAAGAAGATGTTAGAGAGCAATTTGTTGGAGGAGAAAGATGCTCAAAACAAGAACCAAGGCAAAAATGGTGGAGTAGGGGGTTCTTCTCCTGCTGAAGAAGGTGTGACAAAGAAGCGTCGCAGAAAGAGTAAAGAGGAGAAGGATGACATGGAAAAGATGTTAGAGGGCAATTCGTTGGAGGAGAAGAGGCACGGAAGAAAAAGAAAGGTGCTCAAGGAAGATGATGGTGAGTTTGAAATGCCTGCAGAATCTTCAAGAAGTGGCTTTCAGAAACAATATAGTCTTAGGACCCCTAAAGTCATCATGGAAGAGGTGATGCCAAAAATGAACAAGAAAGATCGTAAGCTTATATTTGAGGTCATGTCTCTGTGTCTCAAGCAGCATTGGATTGAAGAGGTATCCTTAATGTGTCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCACATGTTGTAAGACGAAAAGATTTTGTGTACCCTGTCTAGAAAATTGGTATCCTCATTTGGAAGAGGATTATATTGCTGAGAAATGTCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGCTTGAGATCCGATGAACTTATTAAAAAAATGAAGAAAAAAACAGAATCCAATGAAGGCGAGAAGGTTGAACAATCTATGCATTTGCTGCAAGTACTTCTTCCCTATTTAAGGCTGTTGGATGAAGAACAAATGATTGAGAATGAGACAGAAGCGAAGATACAGGGGCACTCAGTCTCAGAGCTAAATATCGTACATGCAGATTTTGATGATGATGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTACAAAATGCTCTTTCGACCTTTGTCTTATCTGTTGCCGTGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAGTTATGTCGGACATTGTCTCTCAAGGTCGTGATTACCTGCATGGTGGTGAAGTAGATAATGAAACTGTAAAACAAAATGAACCAGCTAATGTGGCTAAGCCTGTAGTTCGTGAGTGGTCAAGATCTGGGTGGCATGCAGAAAGTAATGGTAGCATTCCTTGTCCAAAAGTCAATGATGAATGTAACCATGGTTTTCTTGAACTGAGAAGCATATTAGGTCAGCATTTTATCACTGATTTAGTGCGTAAAGCAAACGAACTAGTACAAGCATACAAGCTTCAAGATGTAGTTAAGATCCCTGACAACTACTGTTCGTGTTTGAGGCTTGATAGAAACACAGATGTTAGATATAATAATATGAGGAAGTCTGCTTCTCGTGCAGATTCCAGTGACAACTATTTATACTGTCCTAGGGCTGAAGATCTACAGGATGCAGATTTAAGGCATTTTCAGTGGCATTGGGGAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGCAAGAACATCTGGTTTAAGCTGGGAACCATTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAGACCAAGCATGAACAACATTTGGATGTGAAGGCAATAGATTGCTTAGATTGGTGTGAGGGTGAAATTAATATCCACCAATTCTTTACTGGATATACAAAAGTTCGTGAGGATTGGCTTAATTGGCCTCAAATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACGTTTGCCTCGACATTGTGCAGAGTTCATATCTTCCTTGCCCTTCAAGGAATATACTGATCCTCTCAAAGGTTCTCTTAACGTAGCTATGAAGTTGCCTAAGTGTTGTCTAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCTCAGGAGCTTGGGCGTGGTGATTCAGTGACTAAGCTCCATTGTGATATGTCCGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAAATCAGAACATCTTATTACCATTGAGGAGTTGAAACAAAAGCACGCTGAGCAAGACAAAAGGGAGCTACTTGGTGATGATCAGAATAGAGAAACTAGTGTTGACATGGTTAATAATTCATCTTCTACCATAAATGCTTTGGACAAGCAAAATAGTGTCCAAGTCATGGAACACAATGGTGGATTATGTGATGGGAAAGAAGTTGATCAGTTCCATCAACCCTCTTGTGGTAATGAGGTTGCCATTGCCAATGAGGATGGCCTTTCACATGGATTAGAGCTTAAAGAGGTTGACAAAGTAAAAATAAAGCAACAAAGTGATATGCTGTTTGCGGGATATGGTTCAGAAGGTTCTCTCTGGGATATTTTCCGGAGGCAGGATGTACCTAAATTGCAGGAATATCTGAGGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTGTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTCTATCTGACTGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACGTTTACTCAGAAGGTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTTGCATTGGATTTTGTCTCTCCGGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAAGAATTTCGCACACTTCCAATAAACCACAGCTCTAGTGAGGACAAATTAGAGGTGAAGAAGATGGCAATATATGCTATGCAAGATGTGATCGGAAAATTGGAGGAAGCAAGGTCCGGGAAAACCAAGGTGCCAAAGTAA 3372 0.4155 MACGRKKRRGNTAIIPVDIDAECEVKFAENNGDGAGASSPSPVQQVVKKKRGRKSNKEKEEMEKKKMLESNLLEKEDAQDENHGENDQVGGSSSVQVSVKKKRGRKSKKEKEEMDKKKMLEGNLSEEKDAQNENNGETGGVGGSSSVQEGVAKKRGRKEEDMEKKMLDSNLLEEKDAQNENHGENGGVGGSSSVQGVKKKPGRKSNKEKEEMKKKMLESNLLEEKDAQNKNQGKNGGVGGSSPAEEGVTKKRRRKSKEEKDDMEKMLEGNSLEEKRHGRKRKVLKEDDGEFEMPAESSRSGFQKQYSLRTPKVIMEEVMPKMNKKDRKLIFEVMSLCLKQHWIEEVSLMCHQCQRNDKGRVVRCTCCKTKRFCVPCLENWYPHLEEDYIAEKCPVCRGNCNCKACLRSDELIKKMKKKTESNEGEKVEQSMHLLQVLLPYLRLLDEEQMIENETEAKIQGHSVSELNIVHADFDDDERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPVMSDIVSQGRDYLHGGEVDNETVKQNEPANVAKPVVREWSRSGWHAESNGSIPCPKVNDECNHGFLELRSILGQHFITDLVRKANELVQAYKLQDVVKIPDNYCSCLRLDRNTDVRYNNMRKSASRADSSDNYLYCPRAEDLQDADLRHFQWHWGKGEPVIVSNVLARTSGLSWEPFVMWRAFRQMTKTKHEQHLDVKAIDCLDWCEGEINIHQFFTGYTKVREDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLKGSLNVAMKLPKCCLKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLKSEHLITIEELKQKHAEQDKRELLGDDQNRETSVDMVNNSSSTINALDKQNSVQVMEHNGGLCDGKEVDQFHQPSCGNEVAIANEDGLSHGLELKEVDKVKIKQQSDMLFAGYGSEGSLWDIFRRQDVPKLQEYLRKHFREFRHVHCCPLKQVIHPIHDQTFYLTVEHKRKLKEEYGIEPWTFTQKVGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHSSSEDKLEVKKMAIYAMQDVIGKLEEARSGKTKVPK 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1749 1123 Pfam JmjC domain, hydroxylase 969 1064 IPR003347 -
Aed1g1749 1123 MobiDBLite consensus disorder prediction 151 181 - -
Aed1g1749 1123 Gene3D Cupin 653 1090 - -
Aed1g1749 1123 MobiDBLite consensus disorder prediction 246 294 - -
Aed1g1749 1123 Coils Coil 207 227 - -
Aed1g1749 1123 SMART cupin_9 769 1081 IPR003347 -
Aed1g1749 1123 MobiDBLite consensus disorder prediction 29 302 - -
Aed1g1749 1123 MobiDBLite consensus disorder prediction 54 84 - -
Aed1g1749 1123 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 346 412 IPR018866 -
Aed1g1749 1123 ProSiteProfiles JmjC domain profile. 758 1081 IPR003347 -
Aed1g1749 1123 PANTHER - 173 1108 - -
Aed1g1749 1123 SUPERFAMILY Clavaminate synthase-like 658 1104 - -
Aed1g1749 1123 MobiDBLite consensus disorder prediction 108 133 - -
Aed1g1749 1123 MobiDBLite consensus disorder prediction 201 230 - -
Aed1g1749 1123 ProSiteProfiles Zinc finger RING-type profile. 350 397 IPR001841 -
Aed1g1749 1123 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 173 1108 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1749 Aed-Chr1 15056860 15068733 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed1g1749 JmjC 2e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1749 K15601 - gmx:112997634 1637.47