Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1747 ATGATGTTGACCTATTGCCATGAATTGTTCAAGCCAGTTTCCATCATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACATGTCCATTATAACATATCGACAGGCAATTTCATTCATTTTCATGGCACCTATTGCCTGCATTTATGAAAGGCAAGAACTATTGTTTCTTATCATGAAACACAAATTGGAGGTTCACATAATATGTCTCCTTTTCCTCAGTGCTCTTCTCGGAGTAACAATTCCTCAATACTTATTTCTTCTTGGGCTTAAATACACGTCTGCCACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGATAGAGAAGGTGAACATGCAAAGCAAGAGTGGTAAAGCCAAAGTCATGGGAACTTTTGTGTGCATTGGTGGAGGTTTGTTATTGGTCCTATATAAAGGAATGCCTCTTATCCACCCACAATCTCAACACATAACAAACAAAATTACAAGTACACCTCCAACTGCCAAGTTAGAGAAATGGATTATAGGTTCCATACTTCTGACTCTAGGTTCTCTCCTGTGGTCTTCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCTAGCACAGCTGTTTTGTCACTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGGTCATCAAGAGAGATAATGCTTCGTGGATTCTCAAAGGGAAGCTTGAAATATTGAGTGTAGTATATGCTGGATTGATAGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACCGCAGCTTTTACCCCCTTTATGCAGATATTTGTGGCCATGCTTGATTTCTCTGTACTAAAGGAGGAAATTTACGTGGGAAGGTTGATTTCTTTAATCACTTTCATGATTCCACCCTTTCTACATTCCATTGCACCTAATGTATGTAGCTCTATCTGCAATAAGCAGTGTTGCAGGATCTGCCCTGGTTATTGCTGGCATGTATATTCTTCTATGGGGAAAAAGCAAAGAGGAAGGGCAACATGTTCTGAAGGATACACAAACAAATCAAGATGTAGAATGTCAATAGCAGTGCCACCAATGGCAATGAATAACTTTGATCCAAATGTGTCCTCTAATCATCACAGGATACAAGTTCTCTAA 1224 0.3938 MMLTYCHELFKPVSIMILVNLALAFVNLLLKKVLNEGMDYMSIITYRQAISFIFMAPIACIYERQELLFLIMKHKLEVHIICLLFLSALLGVTIPQYLFLLGLKYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNMQSKSGKAKVMGTFVCIGGGLLLVLYKGMPLIHPQSQHITNKITSTPPTAKLEKWIIGSILLTLGSLLWSSWFIIQAKISKKYPCQYSSTAVLSLFAAIQSAILTLVIKRDNASWILKGKLEILSVVYAGLIGSGLCYVAMSWCVKQRGPVFTAAFTPFMQIFVAMLDFSVLKEEIYVGRLISLITFMIPPFLHSIAPNVCSSICNKQCCRICPGYCWHVYSSMGKKQRGRATCSEGYTNKSRCRMSIAVPPMAMNNFDPNVSSNHHRIQVL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1747 407 Pfam EamA-like transporter family 192 321 IPR000620 GO:0016020|GO:0016021
Aed1g1747 407 Pfam EamA-like transporter family 13 138 IPR000620 GO:0016020|GO:0016021
Aed1g1747 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 67 162 - -
Aed1g1747 407 PANTHER WAT1-RELATED PROTEIN 11 318 - -
Aed1g1747 407 PANTHER WAT1-RELATED PROTEIN 11 318 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1747 Aed-Chr1 15050121 15051911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1747 2 264 Nodulin-like Gene Family AT3G30340 44.106 1.33e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1747 - - gmx:100806247 540.036