Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1716 ATGCAGCATCAGCAGGCAGAGGAGCAGATTGAGGCACCACCGCCCGGCTCCGTACCCGCCCGTCCTTCTTGCTATTTATGCTGTCATTGTTATATTGGAGGGAATGCTGATATCACTTTTTCATGCTTCTTACAGGATCGTGTACGGACTGATGCTTATAAGAATGCAATAATGCGTCATAAGGATTTCATTAAAGGCAAAGTTGTACTTGATGTTGGCTGCGGTACTGGCATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAGCAGGGTGTATGCAGTTGAAGCAAGTGATATTGCCCTGCAGGCACTCCGTGTCATTGAAGATAACAATCTTTCAAACACTATCATGGTAATGCATGGACGAGTTGAGGATTTTCGAATCAATGAAAAGGTTGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATGTGAGAGCATGCTTGGAAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGAGGTCTAGTTCTTCCTTCAAAGGCAACGTTGTACATGGCTCCTTTTACGAATGCAAGGAGATACCGGGAAACCATTGACTTCTGGCGCAATGTTTATGGAATTAATATGTCTGCCATGATACCATTTGCAAAACAGTGTGCATTTGTGGAACCTTCTGTGGAGACAATTACTCGTGAAAATGTTTTGGCATTGCCACAAGTGGTAGAATCTATAACAACAGGGTTTAAGTTCAACTCATTGCTGGGAGCGCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAATTTACTAGGCTAGTATCACCAGAGCCAATAAGTTATCAGTTATCAACTTCACCGGTTGAGGATCATCCAGTGGATAGTGAGAGCCAAAATTTGCTTGAACTGGTCCTGTCCACTGCACCTGAAGCCCGATCCACACATTGGCAACAGTTATGCAGGCCTAACCTTGGTGTACTTTATGAGCCAATAGAAGTGGAACAAGATCAAGTTCTTGAAGGAAAAGTGACAATATCACCGAGCAAAGAAAATCACCGTAAACAGAATATTGAACTTGAATATGCGTGA 1059 0.4306 MQHQQAEEQIEAPPPGSVPARPSCYLCCHCYIGGNADITFSCFLQDRVRTDAYKNAIMRHKDFIKGKVVLDVGCGTGILSIFCAQAGASRVYAVEASDIALQALRVIEDNNLSNTIMVMHGRVEDFRINEKVDVIISEWMGYMLLCESMLGSVITARDRWLKPGGLVLPSKATLYMAPFTNARRYRETIDFWRNVYGINMSAMIPFAKQCAFVEPSVETITRENVLALPQVVESITTGFKFNSLLGAPLHGFAFWFDVEFTRLVSPEPISYQLSTSPVEDHPVDSESQNLLELVLSTAPEARSTHWQQLCRPNLGVLYEPIEVEQDQVLEGKVTISPSKENHRKQNIELEYA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1716 352 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 348 IPR025799 GO:0016274|GO:0018216
Aed1g1716 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 351 IPR029063 -
Aed1g1716 352 Pfam Ribosomal protein L11 methyltransferase (PrmA) 65 139 - -
Aed1g1716 352 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 41 352 IPR025799 GO:0016274|GO:0018216
Aed1g1716 352 Gene3D Vaccinia Virus protein VP39 35 169 IPR029063 -
Aed1g1716 352 PANTHER BNAC03G41340D PROTEIN 41 352 - -
Aed1g1716 352 CDD AdoMet_MTases 69 168 - -
Aed1g1716 352 Gene3D - 171 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1716 Aed-Chr1 14910563 14914565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1716 44 331 C2H2 Transcription Factor Family AT3G12270 35.962 3.45e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1716 K11437 - gmx:100795672 479.174