Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1711 ATGGCGTCATCACAGTCGAAGAAGAGAGTTGACGCCGTCGATTCTTGTACTGCTTCCGTTCTCGTTCGCGCCAAAGATGGCAGTGCTTTTGCTCGATGCGACGATTGTAAGAAGAATGTGCCGGTGGCACTCATCGACATGCACAGTTGCAGCCTTGAAGCCAAAATTAAAATGAATCTAGATGCTCAAGTTGTGGAACAGGCTGCTGAAGCCAAGAAGCCAGAGAGGAAGAAATCCAAATCTAAAGAGCCCAAGGCTAAAAAGGCTAAGGTTGTGAAGGGGAAGAAGGCGAGGGATCCTAACATGCCTAAGCGTCCTCCCACGGCATTCTTTGTCTTCTTGGATGATTTTAGAAAATCTTTCAAGGAAGCTAATCCTGATTCTAAGGATGTTAAAAGGGTTGGCAAAGAGGCTGGTGAGAAGTGGAGATCTATGACTGATGAAGAGAAGAAGCCTTATTTGGATAAAGTTGCTGAACTTAAGGCAGAGTATGAGAAGGCTATGGAAAGCTATGAAGCCGGTCAAGATGAAGAAGTTCAAGCTGGGTCTGACAAGGAAGCCTCTGATAAGGAGGAAGCTGCTTCAAAAGAAGTTGAAGAGGAGCTAACTGACGAAGAGTAA 621 0.4557 MASSQSKKRVDAVDSCTASVLVRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQAAEAKKPERKKSKSKEPKAKKAKVVKGKKARDPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVAELKAEYEKAMESYEAGQDEEVQAGSDKEASDKEEAASKEVEEELTDEE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1711 206 MobiDBLite consensus disorder prediction 168 206 - -
Aed1g1711 206 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 194 - -
Aed1g1711 206 Pfam HMG (high mobility group) box 103 172 IPR009071 -
Aed1g1711 206 CDD HMGB-UBF_HMG-box 103 169 - -
Aed1g1711 206 Gene3D High mobility group box domain 98 174 IPR036910 -
Aed1g1711 206 MobiDBLite consensus disorder prediction 168 197 - -
Aed1g1711 206 SUPERFAMILY HMG-box 94 176 IPR036910 -
Aed1g1711 206 MobiDBLite consensus disorder prediction 78 94 - -
Aed1g1711 206 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 194 - -
Aed1g1711 206 Coils Coil 154 177 - -
Aed1g1711 206 MobiDBLite consensus disorder prediction 66 107 - -
Aed1g1711 206 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 103 172 IPR009071 -
Aed1g1711 206 SMART hmgende2 102 173 IPR009071 -
Aed1g1711 206 MobiDBLite consensus disorder prediction 123 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1711 Aed-Chr1 14884021 14888332 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aed1g1711 HMG_box 2e-21 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1711 K25507 - gmx:100810345 311.612