Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1706 ATGGAAGAGATGTCGGGTTCAGCAACAGCAATAAACTCTTCTAATATAGGATTTCAGCTATTGAAGAAGCATGGGTGGAAAGAAGGGACTGGTCTTGGAGTCTCTCAGCAGGGTAGGTTAGAACCTGTGGAAACTTATGTAAAGAATAATAAACGAGGTTTGGGAGCAGATAAAGTGAAGAAAAAGGTTGTCAAAGAAAAACCTGATCAAAGCGATTCCTCTAAAGGGAACAATCAGCAGGATCATTTACCTAAAAAGAAAAGCAAAACACTTTCTAAACGGATGAGAAAGATGCAGGAGTTTGAAAAGAAGATGCAAGAGAAGGAATTTGAGCGTGCTTTCTTTAGAGAGTTCTGGCCAGATAATGTGTAA 372 0.3925 MEEMSGSATAINSSNIGFQLLKKHGWKEGTGLGVSQQGRLEPVETYVKNNKRGLGADKVKKKVVKEKPDQSDSSKGNNQQDHLPKKKSKTLSKRMRKMQEFEKKMQEKEFERAFFREFWPDNV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1706 123 MobiDBLite consensus disorder prediction 51 72 - -
Aed1g1706 123 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Aed1g1706 123 PANTHER BAT4 PROTEIN-RELATED 4 123 IPR039146 -
Aed1g1706 123 SMART G-patch_5 11 57 IPR000467 GO:0003676
Aed1g1706 123 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Aed1g1706 123 MobiDBLite consensus disorder prediction 28 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1706 Aed-Chr1 14857392 14858730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1706 11 119 C2H2 Transcription Factor Family AT5G26610 32.743 1.05e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1706 - - gmx:100812494 197.593