Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1698 ATGGTGAACGTGGTGGAATTGCAGAAACAGTTGCAGAGGTGGCAGCATAGTGGGAATGTGAATGTCGATGCCAACGGAGAACTCATGTATGTGAAGGTGATGACTGATGAACAATTGGAAACTCTGAGGAAGCAAATAGCGGTGTATTCCACCATTTGTGACCAACTTATTCAGATGCATACAACACTCTCAGCTCAACAGGATCTTGCAGGGGTTAGGTTGGGAAACATATACTGTGATCCATTGATGACATCTGGTGGGCACAAAATAACATCAAGACAAAGGTGGACACCCACACCTGTGCAGCTTCAAATTCTTGAACGTTTATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAGGACATCACTGCTCAACTGGGCCAGCATGGCCAAATTTCTGAAACAAATGTCTATAATTGGTTTCAGAATAGGCGTGCTCGTTCCAAAAGAAAACTGCAAAATGTGGCTCCTAGCAGCAACACTGAATCAGAAGTGGACACTATTGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGAGGAGTTTCAGTCCCAGTCCCAACATAACATAGCAACAACATCTGAAAAGTTGTGCTTCCAGAACCCTCAAGTATACTCTGACTTTCACTACTTGAACCCTGATTCCAACAAACCATATTCCACGTTACAATCAGATGGCAGTTTGAAATCCTCAAGAAATTTCAGTCATGTGTCTGTTTTCAATGAGGTGCTGTCAAACTCAAGGAGTGATTATGTGGGGGGAAAAATGGAAGTTGGTGGTGGGAGTGTGAGCTACAATTTATTCCACCAAACAGGAGACTGCAATCTTGCGGGTTGA 846 0.4291 MVNVVELQKQLQRWQHSGNVNVDANGELMYVKVMTDEQLETLRKQIAVYSTICDQLIQMHTTLSAQQDLAGVRLGNIYCDPLMTSGGHKITSRQRWTPTPVQLQILERLFDQGNGTPSKEKIKDITAQLGQHGQISETNVYNWFQNRRARSKRKLQNVAPSSNTESEVDTIEVDSKDKKTKPEEFQSQSQHNIATTSEKLCFQNPQVYSDFHYLNPDSNKPYSTLQSDGSLKSSRNFSHVSVFNEVLSNSRSDYVGGKMEVGGGSVSYNLFHQTGDCNLAG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1698 281 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Aed1g1698 281 Pfam Homeodomain 93 153 IPR001356 GO:0003677
Aed1g1698 281 PANTHER - 13 280 - -
Aed1g1698 281 SUPERFAMILY Homeodomain-like 91 155 IPR009057 -
Aed1g1698 281 SMART HOX_1 91 158 IPR001356 GO:0003677
Aed1g1698 281 CDD homeodomain 93 154 IPR001356 GO:0003677
Aed1g1698 281 Gene3D - 95 159 - -
Aed1g1698 281 MobiDBLite consensus disorder prediction 169 185 - -
Aed1g1698 281 MobiDBLite consensus disorder prediction 152 191 - -
Aed1g1698 281 PANTHER WUSCHEL-RELATED HOMEOBOX 13 13 280 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1698 Aed-Chr1 14806806 14808692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1698 29 281 Wox Gene Family AT4G35550 48.897 9.10e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed1g1698 Homeodomain 5e-19 CL0123