Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1695 ATGAAGAGAGAAAGAGAATTAGTTGATGGCATAAGCATGGGCAACTACTTGATGTTTCTTTCTGGCACCAATAATTACTTGAACTCTTGTTCCAACAATAACCGTTTGTTTGAGTGCAAGACATGTAACCGGCAGTTCCAGTCGTTTCAGGCATTGGGTGGACACCGTGCGAGTCACAAGAAGCCAAGGTTGATGGGATCAGATCAAGTGGTTGATAATGATGATCATGGTTCAGCACCACCAAAGCCTAAAACACACGAGTGTTCCATTTGCGGATTGGCGTTTGCAATAGGACAAGCTTTGGGAGGACACATGAGGCGCCATAGAGCTGCATCAACTAATTCTTTGCTATTGAGTTCCAGCACTGCTGTTCATGTTCATGTTCATGGTAATAAGGCTAACAACAAGAGGCTTTTGTTTCCTGATTTGAATTTGACGCCTTTGGAGAATGATTTGGAGTTTTTGAAGATTCGACAACCAACTCCTTTGGTTCACTGCTAA 501 0.4291 MKRERELVDGISMGNYLMFLSGTNNYLNSCSNNNRLFECKTCNRQFQSFQALGGHRASHKKPRLMGSDQVVDNDDHGSAPPKPKTHECSICGLAFAIGQALGGHMRRHRAASTNSLLLSSSTAVHVHVHGNKANNKRLLFPDLNLTPLENDLEFLKIRQPTPLVHC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1695 166 Pfam C2H2-type zinc finger 37 62 - -
Aed1g1695 166 Pfam C2H2-type zinc finger 86 110 - -
Aed1g1695 166 PANTHER ZINC FINGER PROTEIN ZAT5 12 154 - -
Aed1g1695 166 Gene3D Classic Zinc Finger 34 108 - -
Aed1g1695 166 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Aed1g1695 166 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Aed1g1695 166 SMART c2h2final6 86 108 IPR013087 -
Aed1g1695 166 SMART c2h2final6 37 59 IPR013087 -
Aed1g1695 166 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Aed1g1695 166 PANTHER ZINC FINGER PROTEIN ZAT12 12 154 - -
Aed1g1695 166 SUPERFAMILY beta-beta-alpha zinc fingers 35 108 IPR036236 -
Aed1g1695 166 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1695 Aed-Chr1 14792288 14792788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1695 1 155 C2H2 Transcription Factor Family AT2G37430 45.882 4.22e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed1g1695 zf-C2H2_6 1.9e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1695 - - gmx:100816598 201.445