Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g1695 | ATGAAGAGAGAAAGAGAATTAGTTGATGGCATAAGCATGGGCAACTACTTGATGTTTCTTTCTGGCACCAATAATTACTTGAACTCTTGTTCCAACAATAACCGTTTGTTTGAGTGCAAGACATGTAACCGGCAGTTCCAGTCGTTTCAGGCATTGGGTGGACACCGTGCGAGTCACAAGAAGCCAAGGTTGATGGGATCAGATCAAGTGGTTGATAATGATGATCATGGTTCAGCACCACCAAAGCCTAAAACACACGAGTGTTCCATTTGCGGATTGGCGTTTGCAATAGGACAAGCTTTGGGAGGACACATGAGGCGCCATAGAGCTGCATCAACTAATTCTTTGCTATTGAGTTCCAGCACTGCTGTTCATGTTCATGTTCATGGTAATAAGGCTAACAACAAGAGGCTTTTGTTTCCTGATTTGAATTTGACGCCTTTGGAGAATGATTTGGAGTTTTTGAAGATTCGACAACCAACTCCTTTGGTTCACTGCTAA | 501 | 0.4291 | MKRERELVDGISMGNYLMFLSGTNNYLNSCSNNNRLFECKTCNRQFQSFQALGGHRASHKKPRLMGSDQVVDNDDHGSAPPKPKTHECSICGLAFAIGQALGGHMRRHRAASTNSLLLSSSTAVHVHVHGNKANNKRLLFPDLNLTPLENDLEFLKIRQPTPLVHC | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g1695 | 166 | Pfam | C2H2-type zinc finger | 37 | 62 | - | - | |
Aed1g1695 | 166 | Pfam | C2H2-type zinc finger | 86 | 110 | - | - | |
Aed1g1695 | 166 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 12 | 154 | - | - | |
Aed1g1695 | 166 | Gene3D | Classic Zinc Finger | 34 | 108 | - | - | |
Aed1g1695 | 166 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 37 | 64 | IPR013087 | - | |
Aed1g1695 | 166 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 39 | 59 | IPR013087 | - | |
Aed1g1695 | 166 | SMART | c2h2final6 | 86 | 108 | IPR013087 | - | |
Aed1g1695 | 166 | SMART | c2h2final6 | 37 | 59 | IPR013087 | - | |
Aed1g1695 | 166 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 86 | 113 | IPR013087 | - | |
Aed1g1695 | 166 | PANTHER | ZINC FINGER PROTEIN ZAT12 | 12 | 154 | - | - | |
Aed1g1695 | 166 | SUPERFAMILY | beta-beta-alpha zinc fingers | 35 | 108 | IPR036236 | - | |
Aed1g1695 | 166 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 88 | 108 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g1695 | Aed-Chr1 | 14792288 | 14792788 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g1695 | 1 | 155 | C2H2 Transcription Factor Family | AT2G37430 | 45.882 | 4.22e-37 | 124 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aed1g1695 | zf-C2H2_6 | 1.9e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g1695 | - | - | gmx:100816598 | 201.445 |