Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1689 ATGGCAGTGTATAGAATTGCAATTGGTTCGCCTAGAGAGGCTAGCAATCCTGCTGCAATCAGAGCAGCATTTGCTGAGTTCTTTTCTATGCTCATTTTTGTTTTCGCTGGACAAGGCTCCGGCATGGCCTATAGCAAACTTACCGGCGATGGAGCTGCAACTCCTGCTGGTCTCATAGCTGCATCATTGTCTCATGCATTTGGGCTTTTTGTGGCGGTTTCTGTGGGGGCTAACATTTCTGGGGGTCATGTCAACCCTGCTGTGACTTTTGGTGCTTTCATTGGGGGAAACATAACCCTCCTCAGAAGTATTTTGTATTGGATTGCACAGTTACTCGGTTCTGTTGTTGCTTGCATTCTTCTTAATTTTGCTACTGGTGGAATGGAAATAGCAGCTTTCTCTCTGTCCTCTGGTGTGTCAGTGTGGAATGCACTAGTTTTTGAGATTGTGATGACATTTGGTTTGGTATACACAGTTTACGCGACAGCAGTGGACCCAAAGAAGGGGAATGTGGGTGTGATTGCCCCAATAGCAATTGGGTCAATTGTGGGAGCCAACATCTTGGTTGGTGGGGCTTTTGATGGAGCATCTATGAACCCAGCAGTGTCTTTTGGGCCATCTCTTGTTAGCTGGTCATGGACTAATCACTGGGTCTATTGGGTTGGCCCATTCGTTGGTTCAGCTGCTGCTGCCATTCTCTATGATAATATCTTCATTGGTGATGATGGTCATGAGCCCCTTACAAACAGTGATTTCTAG 759 0.4638 MAVYRIAIGSPREASNPAAIRAAFAEFFSMLIFVFAGQGSGMAYSKLTGDGAATPAGLIAASLSHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRSILYWIAQLLGSVVACILLNFATGGMEIAAFSLSSGVSVWNALVFEIVMTFGLVYTVYATAVDPKKGNVGVIAPIAIGSIVGANILVGGAFDGASMNPAVSFGPSLVSWSWTNHWVYWVGPFVGSAAAAILYDNIFIGDDGHEPLTNSDF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1689 252 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 SUPERFAMILY Aquaporin-like 16 241 IPR023271 -
Aed1g1689 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Aed1g1689 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Aed1g1689 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1689 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Aed1g1689 252 PANTHER AQUAPORIN TIP1-1 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1689 Aed-Chr1 14770350 14771534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1689 1 252 Major Intrinsic Protein MIP AT4G01470 83.333 6.80e-152 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1689 K09873 - gmx:100818197 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1689 1 14770350 14771534 Aed1g1689 1 14770350 14771534 ECH