Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1654 ATGCCATTTGGAGTTAGCACAGCAACTGCAAGTCGCCGGTGGTCTCTGCACACCGTTCTCAACACTCACCGCAACTTGTATTCTTTGGCTTTGTCTAAACCTCAGTTTTATGGCAATTGCCACGAATTTTTGCCGTGGTTGGAGGGGAAAGCTGGTTCTAGGATTTCGTCCTCACTTTTTATTGGAAATTCTTCATATGGAAGGTCTCTGTTTGCTTCTAAAATAATACAAGCTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGGTACGCTTCGCAACTCAAATAACTGCAGATAATATCCTTCCCGAAATCAGATCTTTGACTGGTGAGGAAGTTGGAAATATTGCCAAACTTGCTGTTGTTATTCTGATTGAGAAGAAACTGGGTCAGGGCTCCGAGTGGTATCCTTATATCAGCTGTCTTCCACAACAAGGAGAGTTGCATAATACAGCAAGTTTTCCTTCCTTTTCTTACTTTGAGTGGTGTTTGTTCCTGGTATTTTGGACTGAAAGTGAGTTGGAGATGATTCGACCAAGTTCAGTTTATCAGGAAACTATTGACCACAAATCTCAAATTGAGAAGGACTTTTTGGCAATCAAGCGTGTTTTTGAATGTTCCCATCAAAGTTTTGGAGATTTTACTTACAAGGACTTCATGCATGCATGCACATTAGATGAAGGAACTGCATGTAAGGTCGCTGAGCTGTTCATAAAGGTTAATATAGCAAGTTCATTTCTGTCAACCGATGCTGCAGTCTACCTTTTCTATTCTTTGGACACTCTACTGAATTTTGAAAGCGGTGATAAACCTCATTTATTATTATGTTGCATTGAATATGAAAACTCATTCTTAGTTCTTGATCACTTCAATGTTGAATCACCAGTTGGTTCTCGAGCATGGGGAAGCACAAATGGTTTAGCTCTGATTCCATTTGCAGATTTCTTAAACCATGATGGAGGTTCAGAAGCAATTGTAATGAGCGATGATGACAAACAATGCTCAGAAGTTCGATCTCTCTCTCTCTCTTTCTCTCACACACATTTTTGCCTTGTATCTAATCTATCAATGGTACTAATAAGATATGGAAAGTTTTCAAATGCTACATTAATGCTGGACTTTGGTTTTACAATTCCATACAACGTTTACGATCAGGTTCAGATCCAGTTTGATATTCCTAAGCATGACCCTCTGCATGCCATGAAGTTGGAACTCTTGCATCAGTACTTTGTACCTCCACCTGAAGATATGAAGGGCTTGTCACATCCTGTGAATTCTTTCAGTATCAAGGAGGTGAAGTCTGATGGAGGAAAAGGGAAGGGTCTTCCACAATCACTTCGTGCGCTTGCTCGTGTTCTTTCTTGTACCACATCTCTGGAACTTGAGGATTTGGCAATGGAAGCTGCTCAAACTGATGGTAGGCTGGCTAGGTGCTCTTTACAGGATATCAGCAAAGAGATAGAAGCACACATGATGTTGTTGTCATTATTCATCCAATTAATTGAGGAGCGTAATGCCACCATTATGCCACTGGATTCTTCCTATTCTCCCTCGTGTGAAAGACTTTATGTTAGAAGACTAATGGCTCAAGATCTCCTAGATGGTGAGCTTCGCATTCTCAAATCTGCTTCTGCCTGGCTGGACCACTACTGTTTTTCCTTGACTTGA 1668 0.4077 MPFGVSTATASRRWSLHTVLNTHRNLYSLALSKPQFYGNCHEFLPWLEGKAGSRISSSLFIGNSSYGRSLFASKIIQAGDCILKVPYRVVRFATQITADNILPEIRSLTGEEVGNIAKLAVVILIEKKLGQGSEWYPYISCLPQQGELHNTASFPSFSYFEWCLFLVFWTESELEMIRPSSVYQETIDHKSQIEKDFLAIKRVFECSHQSFGDFTYKDFMHACTLDEGTACKVAELFIKVNIASSFLSTDAAVYLFYSLDTLLNFESGDKPHLLLCCIEYENSFLVLDHFNVESPVGSRAWGSTNGLALIPFADFLNHDGGSEAIVMSDDDKQCSEVRSLSLSFSHTHFCLVSNLSMVLIRYGKFSNATLMLDFGFTIPYNVYDQVQIQFDIPKHDPLHAMKLELLHQYFVPPPEDMKGLSHPVNSFSIKEVKSDGGKGKGLPQSLRALARVLSCTTSLELEDLAMEAAQTDGRLARCSLQDISKEIEAHMMLLSLFIQLIEERNATIMPLDSSYSPSCERLYVRRLMAQDLLDGELRILKSASAWLDHYCFSLT 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1654 555 Gene3D - 379 550 IPR036464 -
Aed1g1654 555 SUPERFAMILY SET domain 41 381 IPR046341 -
Aed1g1654 555 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 39 288 - -
Aed1g1654 555 PANTHER OS01G0976450 PROTEIN 39 288 - -
Aed1g1654 555 Pfam Rubisco LSMT substrate-binding 394 540 IPR015353 -
Aed1g1654 555 Gene3D set domain protein methyltransferase, domain 1 38 376 - -
Aed1g1654 555 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 287 548 - -
Aed1g1654 555 Pfam SET domain 67 319 IPR001214 GO:0005515
Aed1g1654 555 PANTHER OS01G0976450 PROTEIN 287 548 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed1g1654 SET 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1654 K19199 - gmx:100818002 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1654 1 14558372 14564373 Aed1g1654 1 14558372 14564373 ECH