Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1639 ATGCCAGAGCTTCGTAGTGGAGTGCGACGTGGGCGTGGCCGTGGCCAGAAAGCATCGGAACCGGCAAAGAAGGAGGTGAAGGCTCGTGCGGCGCCGAGAGGGAGACCGAGGACTAGATTGGCGGCGAAAGAATTGGAGCACCAGGAGCCGTTGACCCCGTTACCGATCTCGATACCGGAACCGTTGATCCCGATCCCGATACCGGAGCCGGCGAAAGAAGAGAAAAAGGAAGAAGGTGTGGGCGTCAATATGGGTGATGAAAGTGGTGGGTTGAGTGGCAATAAGCCCGAGGAGGAGCCCGTCGCTCCACCTTTCCCAGATAGGGTTCAAGTGGGAGGATCGCCCATGTACAAGGTAGAGAGAAAATTGGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGCCGCCGTGAGCGGGCGGCAGGTGCTGGAGCTGTGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAGGGCTGTAACTATGGCCCTCCTTATGAGTGGCAAGTATACAACACCCTCGGGGGTAGTTATGGAATACCAAAAGTACACTATAAAGGAAGACAAGGAGAATACTATGTGATGGTTATGGACATACTTGGTCCAAGTTTGTGGGATCTCTGGAATACCTCAAGCCAGATGATGTCTGCTGAAATGGTCTCATGTATAGCGGTCGAGTCCTTATCAATACTTGAGAAGATGCACTCAAAAGGTTATGTGCATGGAGATGTAAAACCAGAGAACTTTTTACTTGGTCAGCCAGCTACAGTGCAAGAGAAGAAACTGTTTCTTGTTGACCTTGGATTAGCAACAAAATGGAGAGACGCCAACAGTGGACAGCATGTTGACTATGATCAACGTCCTGATATGTTTAGAGGAACTGTTCGATATGCTAGTGTTCATGCTCATTTGGGGAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATACACACTAGTCTTCCTTCATAAGGGTCGATTACCATGGCAAGGTTACCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGGACATCTCCTGAAACGCTGTGCTGCATGTGCCCTCCCCCTTTTAGGCATTTTCTTGAGATGGTAGTGAATATGAAATTTGATGAAGAACCTAATTATTCCAAGCTAATATCTTTGTTTGATGGTACAATTGGACCCAACCCAGCATTGCGGCCAATTAATACTGATGGTGCCCTAAAGGTTGGCCAAAAGCGGGGTAGATTGAATATTGAAGATGATGATTCACAGCCAAGAAAGAAGGTTCGTTTAGGGGTTCCTGCTACACAATGGATTTCAATTTACAATGCAAGACTGCCAATGAAACAAAGGTACCATTACAATGTGTCTGATGCAAGATTAGAACAGCATGTTGAGAGAGGGATTGCAGATGGCCTTCTTATCAGTTGTGTGTCTTCTTGTTGCAATCTTTGGGCCCTTATTATGGATGCTGGAACTGGTTTCACAGCTCAAGTTTACAAGTTGTCAACTTTTTTCTTGCACAAGGAATGGATTATGGAGCAATGGGATAAAAACTTTTACATTACTTCTATTGCAGGGAGCAACAATGGCAGCTCTCTTGTGGTGATGTCAAAAGGTTTGATTGCTAAACGACGATTTTGTTTGAACTCATGGATTTCTGAAGACCTCTCTACATATAATGCTTCTGCAGGTACACAATATACTCAACAATCCTACAAAGTGAGTGAATCTTTCCCCTTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTCACTTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGGAATGCTGGATTCAGTAAACAGGTGGTTGAACTTGATTTTCTGTATCCAAGTGAGGGCATACATAAACGTTGGGATAAGGGTTATAGGATTACAGCAACTGCAGCTACATTGGATCAATCTGCTCTTATATTAAGCATTCCGAGACGCAAACTCAGTGATGAAACTCAGGAAACTCTACGCACATCGCAATTTCCCAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCCTGTTTATGCTACGGACGCACAGTATGCTGA 2097 0.4502 MPELRSGVRRGRGRGQKASEPAKKEVKARAAPRGRPRTRLAAKELEHQEPLTPLPISIPEPLIPIPIPEPAKEEKKEEGVGVNMGDESGGLSGNKPEEEPVAPPFPDRVQVGGSPMYKVERKLGKGGFGQVFVGRRERAAGAGAVEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSYGIPKVHYKGRQGEYYVMVMDILGPSLWDLWNTSSQMMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATVQEKKLFLVDLGLATKWRDANSGQHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPETLCCMCPPPFRHFLEMVVNMKFDEEPNYSKLISLFDGTIGPNPALRPINTDGALKVGQKRGRLNIEDDDSQPRKKVRLGVPATQWISIYNARLPMKQRYHYNVSDARLEQHVERGIADGLLISCVSSCCNLWALIMDAGTGFTAQVYKLSTFFLHKEWIMEQWDKNFYITSIAGSNNGSSLVVMSKGLIAKRRFCLNSWISEDLSTYNASAGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSKQVVELDFLYPSEGIHKRWDKGYRITATAATLDQSALILSIPRRKLSDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1639 698 SUPERFAMILY Protein kinase-like (PK-like) 117 396 IPR011009 -
Aed1g1639 698 PANTHER CASEIN KINASE I-LIKE PROTEIN 563 671 - -
Aed1g1639 698 MobiDBLite consensus disorder prediction 1 112 - -
Aed1g1639 698 ProSiteProfiles Protein kinase domain profile. 117 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1639 698 MobiDBLite consensus disorder prediction 1 46 - -
Aed1g1639 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Aed1g1639 698 Gene3D Transferase(Phosphotransferase) domain 1 97 421 - -
Aed1g1639 698 Pfam Protein kinase domain 117 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1639 698 PANTHER CASEIN KINASE-RELATED 71 538 - -
Aed1g1639 698 PANTHER CASEIN KINASE-RELATED 563 671 - -
Aed1g1639 698 CDD STKc_CK1 116 387 - -
Aed1g1639 698 ProSitePatterns Protein kinases ATP-binding region signature. 123 150 IPR017441 GO:0005524
Aed1g1639 698 SMART serkin_6 117 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1639 698 MobiDBLite consensus disorder prediction 54 68 - -
Aed1g1639 698 PANTHER CASEIN KINASE I-LIKE PROTEIN 71 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1639 Aed-Chr1 14475544 14480758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1639 87 345 AGC Kinase Gene Family AT3G08730 23.106 1.11e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Aed1g1639 Pkinase 5.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1639 - - gmx:100783819 1246.49