Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1636 ATGGTATCAGCTACAATTAGGCGAATTGTATCGCCCTGTTGGAGACCATCTGACGTGGGTGAAATTTCTAGTAGGCATGGAGACGCAAATGGACGTGCCAATGGTTTGTTGTGGTATAAAGATTCGGGACGACACGCCATTGGTGATTTCTCAATGGCTGTTATTCAAGCAAACAATTTGTTAGAGGATCAAAGCCAACTTGAATCAGGACCCTTGAGCTTTGCCGAGGGTAGTGCTCAAGGAACTTTTGCTGGTATTTACGATGGCCATGGAGGTCCTGAAGCTGCCCGATTCGTCAATGACCGTTTATTTAAAAACATCAAGAAATTTACTTCGGAAAATAATGGAATGTCAGCTGATGTTATCAACAAAGCATTCTTGGCAACAGAAGAAGAGTTTCTTTCTGTGGTAGAGAAGAAATGGCTGCATAAGCCGCCGATAGCATCAGTTGGATCTTGCTGTTTGATAGGCATAATATGTAGTGGGGAGCTCTATATTGCAAATGCAGGAGATTCTCGAGCAGTATTAGGTAGACTTGATGAGGCTACTAAAGAGATTAAAGCTGTTCAACTATCCGCCGAGCACAATGCTAGCCTCGCATGTGTCAGAGAAGAGTTGCGCACATTGCATCCTCATGATCCGCAGATTGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTCATTCAGATTTCAAGATCCATTGGTGATGCGTATCTAAAGAAGGCAGAGTTTAATAAAGCACCATTATTATCGAAATTTCGACTCCCGGAACCATTTGAGCAGCCAATCCTTAAAGCAGAACCAGCAATACTAGTACAGAAACTGTGTCCTCGAGATCAGTTTCTTATATTTGCATCAGATGGGTTATGGGAACAAATGAGCAATCAAGAAGCAGTTGACATTGTCCAGAGCGGTCCACGTAATGGAGTAGCGAAGAAACTTGTGAAAACAGCACTTTGTGAAGCTGCGAAGAAAAGAGAAATGAGATACTCAGACTTGAAAAAGATTGACAGAGGGGTGAGGAGACACTTCCATGATGACATCACGGTTATAGTATTGTATCTTGATTCAAATATTTGGACCCGTGCCAGTTCACGTGTACCCTTGGTTTCGATCAAAGGAGGTGGTGACAGTGGTTATGGTATTGGTATTATAGATGCCTAG 1170 0.4325 MVSATIRRIVSPCWRPSDVGEISSRHGDANGRANGLLWYKDSGRHAIGDFSMAVIQANNLLEDQSQLESGPLSFAEGSAQGTFAGIYDGHGGPEAARFVNDRLFKNIKKFTSENNGMSADVINKAFLATEEEFLSVVEKKWLHKPPIASVGSCCLIGIICSGELYIANAGDSRAVLGRLDEATKEIKAVQLSAEHNASLACVREELRTLHPHDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKAEFNKAPLLSKFRLPEPFEQPILKAEPAILVQKLCPRDQFLIFASDGLWEQMSNQEAVDIVQSGPRNGVAKKLVKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDSNIWTRASSRVPLVSIKGGGDSGYGIGIIDA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1636 389 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 379 - -
Aed1g1636 389 SUPERFAMILY PP2C-like 74 358 IPR036457 -
Aed1g1636 389 PANTHER ALPHABET, ISOFORM E-RELATED 8 379 - -
Aed1g1636 389 SMART PP2C_4 23 355 IPR001932 -
Aed1g1636 389 Pfam Protein phosphatase 2C 76 327 IPR001932 -
Aed1g1636 389 Gene3D - 34 366 IPR036457 -
Aed1g1636 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Aed1g1636 389 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Aed1g1636 389 CDD PP2Cc 50 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1636 Aed-Chr1 14459944 14464861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1636 3 379 PP2C-type Phosphatase Gene Family AT3G12620 74.603 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1636 K01102 - gmx:100807559 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1636 1 14459944 14464861 Aed1g1636 1 14459944 14464861 ECH