Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1629 ATGGCCCTCAACTCTCCCAAGTCCACCACCAGCGTCGTCCCAAATGAAATGGGGCAACTTGGGTTGAGTCAAAGGATCACTAAGCTGAGAAAAACCTCATTGACCGCACAAAAACGATCGTGGTTGGTTAATAACGACACTGAGAGTATCATAAGAGCGAGTCAGATTGTAAGAGCTCAACTGGTGCGTGCAGTGTCCTGCTCCCGAGTTTCCAATGCTGTTGTTGTTGCGGACACTGATCATGACAAAAAGAAAGCCATCGAGATTAGCCAAGCCAAACTTCTGTGTGCCTCAGCATTTGCTCCTAAATATAACAATGAGACTGCTGTTGTTGGTGGCACTTGGAAAAGTCCCACATCACTCGCGCTTGCGGTTAGGCACCGTTTAACTGATTCAACGCCCCAACCCTGCAAACCGCGTCGTTTTGCTTATCCGGTGCTTAGCTCTCATTATAATAATGGGTCAGATGTTGATACTGGGATTGGGAATGGCATCACCCTTTCTCCCTCTCCGTTGTCTGTTTGTTTTCCCCATGAAAATGAAACCAATGACAGCAGCAGCAAGTACGATGGTCGGATGCATAGCTATCCGTACAAGAAAAACGGGCCGTACACGTGTCCGAAGTGCGAGCGCGTGTTTGAGACATCGCAACGGTTTGCGGCGCACGTGAGTTCGAGTCACTACAAGTACGAGAGCAAGAGTGAGAGAAAGAAGAGACTGATGGCCAAAATCCGAAGGAGAAATCTCCGTATTGAATGGTCAACTGATGGTGGACTAACTGTTGTTCCTGACGATGACGATGACGATGACGATGCTTCTCCGCCTCCAACTACAACATATTCATATGCACGAAATAACAACAACGTTGTTAGAGGAGTCAAGGTTGAAGGTGAGACTCATGGTGTGGCGCTTCAGCTTGCTCCTCCTCCTGGATGGGAAAAATTAACTGCTGGAGATGGAGGTGCCAAAATCAAATTGGAGCCTGTCAATACATGA 996 0.4779 MALNSPKSTTSVVPNEMGQLGLSQRITKLRKTSLTAQKRSWLVNNDTESIIRASQIVRAQLVRAVSCSRVSNAVVVADTDHDKKKAIEISQAKLLCASAFAPKYNNETAVVGGTWKSPTSLALAVRHRLTDSTPQPCKPRRFAYPVLSSHYNNGSDVDTGIGNGITLSPSPLSVCFPHENETNDSSSKYDGRMHSYPYKKNGPYTCPKCERVFETSQRFAAHVSSSHYKYESKSERKKRLMAKIRRRNLRIEWSTDGGLTVVPDDDDDDDDASPPPTTTYSYARNNNNVVRGVKVEGETHGVALQLAPPPGWEKLTAGDGGAKIKLEPVNT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1629 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 204 232 IPR013087 -
Aed1g1629 331 MobiDBLite consensus disorder prediction 257 283 - -
Aed1g1629 331 SMART c2h2final6 204 227 IPR013087 -
Aed1g1629 331 ProSitePatterns Zinc finger C2H2 type domain signature. 206 227 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1629 Aed-Chr1 14348810 14349805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1629 179 272 C2H2 Transcription Factor Family AT2G18490 46.809 5.77e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed1g1629 None None None