Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1617 ATGAGAAAGGAACTGCAAGAGGGATGCCGAGCTTCGATTCACAACTACCCAATTCCAATGCATGACTCAGTTTTTGACTCACTAAAAGTAAGTAGCCAAACAATTTCTCGGTGTCCTGTTCAAGTTGATTCCTTTGATAAGTTACCAACTTCACTCGATAAAAACCCATTAACAAACCAAACAGAGCGACGAAGTTTGCAATTACGAAAGGTTCAATCATCAAATCTGGTCAGTGGTGATACGGAACACCAGGAAGAGTCTGCGATGGCTGACGCCAGTCCTAGAACTGATATTTCTACAGATGGTGACACTGATGATAAGAATCCACGGTTTGATAGAAGTCAGTCCCTTGTTGCTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGGAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGGCTGAGAAAGAAAGCTTATGTTCAACAGCTTGAAAGTAGTCGCTTAAAGTTGACCCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGCAGGGTTCAATTATTTCCTCCGTCTTCTTTTTAATGACACTTTGACCAAGCAATGGGCACAGCATATTCAATTTAAACTCAAATCTTTTGTTATTTTCCTGCAGGGAGTCTTTATATCAAGCTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCTATGGCATTTGACGTAGAATATGCAAGATGGCTGGAAGAGCAGAATCGACAAACTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAGGTGATACAGAACTTCGCATGATTATTGATGGTATAATGGAACATTATGATGAGATATTTAGGCTGAAGGCCAATGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGAATGTGGAAGACACCAGCAGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAATCAGTTGGAACCTCTGACGGAGGAACAGTTAGTGGGTATTACCAACTTGCAGCAGTCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTTCTGAGACATTATCCACTGGATCACTTGGCTCCTCTGGTTCATCAGGCAATGTGGCAAACTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGGACACTTGAGGGGTTCATTAAGCAGGCTGACAATTTGCGCCAGCAGACGCTGCAACAAATTCACCGCATATTGACAACTCGACAATCGGCTCGTGCACTGCTTGCAATACATGACTACTTTTCTAGGCTGCGTGCCCTTAGCTCTCTTTGGCTTGCCCGCCCAAGAGACTGA 1368 0.4488 MRKELQEGCRASIHNYPIPMHDSVFDSLKVSSQTISRCPVQVDSFDKLPTSLDKNPLTNQTERRSLQLRKVQSSNLVSGDTEHQEESAMADASPRTDISTDGDTDDKNPRFDRSQSLVAVASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQAGFNYFLRLLFNDTLTKQWAQHIQFKLKSFVIFLQGVFISSSGDQAHSMSGNGAMAFDVEYARWLEEQNRQTNELRAAVNSHAGDTELRMIIDGIMEHYDEIFRLKANAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEEQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1617 455 PANTHER TRANSCRIPTION FACTOR TGA9 26 184 - -
Aed1g1617 455 MobiDBLite consensus disorder prediction 46 137 - -
Aed1g1617 455 Coils Coil 154 181 - -
Aed1g1617 455 MobiDBLite consensus disorder prediction 51 82 - -
Aed1g1617 455 Pfam Seed dormancy control 253 327 IPR025422 GO:0006351|GO:0043565
Aed1g1617 455 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 133 177 IPR004827 GO:0003700|GO:0006355
Aed1g1617 455 Gene3D - 134 183 - -
Aed1g1617 455 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 138 153 IPR004827 GO:0003700|GO:0006355
Aed1g1617 455 Pfam bZIP transcription factor 135 175 IPR004827 GO:0003700|GO:0006355
Aed1g1617 455 SMART brlzneu 131 194 IPR004827 GO:0003700|GO:0006355
Aed1g1617 455 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 216 455 - -
Aed1g1617 455 MobiDBLite consensus disorder prediction 98 112 - -
Aed1g1617 455 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 26 184 - -
Aed1g1617 455 PANTHER TRANSCRIPTION FACTOR TGA9 216 455 - -
Aed1g1617 455 SUPERFAMILY Leucine zipper domain 135 180 IPR046347 GO:0003700|GO:0006355
Aed1g1617 455 ProSiteProfiles DOG1 domain profile. 235 452 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1617 Aed-Chr1 14252652 14260917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1617 89 455 bZIP Transcription Factor Family AT3G12250 72.752 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g1617 DOG1 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1617 K14431 - gmx:100816123 653.284