Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1612 ATGGAATACCAATACGAATACGGGGTTTTGAGTTTGTTGGTGTTAGCCATTTTGGCGTGGAGAATAATGGAACGTAGTAGTAATCAGCTTCCACCAGGACCAAGATGCTGGCCAGTGGTTGGGAGCATTTTCCAACTAGTAGGGTGGTCACCACATGAGTCCTTAACAAAACTGGCTCATAAACATGGTCCAATCATGACCCTTTGGCTCGGGTCTATGTGCACCGTGGTTATCTCATCCAGCCATGTGGCTCGACACATGTTCAAAAACCATGACGCAGTTCTTGCCGGAAGGAAGATTTACGAGGCCATGAGAGGGGATCATGGCACTGAGGGCTCCCTCGTAACTTCACAATACAACTCACACTGGCGCATGCTGAGGCGCTTGTGCACCACTGAGTTCTTTGTCACCACTCGCTTAGACGCCATGCGTGGTGTGCGTGCAAAATGCATACACCGCATGCTGCACTCCATACACCAAAAATCTGGCACTGTTGTTGATGTTGGCAGGTTCCTTTTCTTGATGGATTTCAACCTTATTGGGAACCTCATATTCTCAAAGGACTTGTTGGACTCTGAAACGGAGAGAGGGGAAAGATTTTACTACCATGCACTTAAGGTTATGGAGTATGCTGGGAAACCCAACGTTGCAGATTTCTTGCCAATTCTCAAGTGGCTTGACCCTCAGGGTATAAGGAGAAAAACACAATTTCATGTTGACCAAGCCTTTGACATCGCAGGTTTGTTCATAAAAGAAAGGATGGAAAGTGGTCCATCATCAAAGGAAACCAAAGACTACTTGGATGTCCTCTTGGACTTTCGTGGGGAGGATGCATATGCCTTTTCTTCAAGAACCATAAACGTCATTATCTTTGAAATGTTCACTGCAGGGACAGACACGACAACAAGCACCATTGAATGGGCAATGGCAGAGCTTCTGCACAACCCAACAGCTCTAAAGAAAGTGCAGATGGAGTTGAGGAGTGAAATAGGAGCAGATAGGAGTATGGAAGAAAAGGACATAGAAAATCTTCCCTACCTCCAAGCAGTAATCAAGGAGACACTGAGGCTTCACCCACCTCTTCCTCTTCTGGTTCCTCACATGGCCATGGAATCTTGCAACATGCTTGGCTACAACATTCCCAAAGGGTCACAAATCTTGGTGAATGTTTGGGCAATTGGGAAGGACCCAAAAGTGTGGGATGCTCCCTTATTGTTCTGGCCTGAAAGGTTTATGGAGGCAAACATGGCAGATTACAAGGGACAGCATTTTGAGTATATTCCCTTTGGTTCAGGTCGAAGAATGTGCCCAGCAATGCCACTTGCCTCTCGCTTGCTTCCCCTGGCTTTAGGCTCACTCTTGCATTCCTTTGATTGGGTCTTGCCAGATGCCCTCAAACCAGAGGAGATGGACATGACAGAGGGACTCGGAATAACACTAAGAAAAGCCGTTCCTTTGAAACTCATACCAGTCCCTTACACTTACACAGGACCTACCGCTGTTGATCAGATATAA 1515 0.466 MEYQYEYGVLSLLVLAILAWRIMERSSNQLPPGPRCWPVVGSIFQLVGWSPHESLTKLAHKHGPIMTLWLGSMCTVVISSSHVARHMFKNHDAVLAGRKIYEAMRGDHGTEGSLVTSQYNSHWRMLRRLCTTEFFVTTRLDAMRGVRAKCIHRMLHSIHQKSGTVVDVGRFLFLMDFNLIGNLIFSKDLLDSETERGERFYYHALKVMEYAGKPNVADFLPILKWLDPQGIRRKTQFHVDQAFDIAGLFIKERMESGPSSKETKDYLDVLLDFRGEDAYAFSSRTINVIIFEMFTAGTDTTTSTIEWAMAELLHNPTALKKVQMELRSEIGADRSMEEKDIENLPYLQAVIKETLRLHPPLPLLVPHMAMESCNMLGYNIPKGSQILVNVWAIGKDPKVWDAPLLFWPERFMEANMADYKGQHFEYIPFGSGRRMCPAMPLASRLLPLALGSLLHSFDWVLPDALKPEEMDMTEGLGITLRKAVPLKLIPVPYTYTGPTAVDQI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1612 504 PANTHER CYTOCHROME P450 76A1-LIKE 21 496 - -
Aed1g1612 504 PANTHER CYTOCHROME P450 FAMILY 1 21 496 - -
Aed1g1612 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Aed1g1612 504 Gene3D Cytochrome P450 23 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 Pfam Cytochrome P450 31 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g1612 504 SUPERFAMILY Cytochrome P450 31 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1612 Aed-Chr1 14232639 14234228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1612 24 496 Cytochrome P450 AT3G52970 61.078 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1612 - - gmx:100778988 830.861