Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1611 ATGAAGGGTTCGCGCAGAAGCAACGACAACATTGACAATGGCGATGGCGATGAAAATGTGAAGAGGAAAGCGGCCAGCGAGCAGAACCCCGCCACTCGCAGGGTCATACGCTCCCAGTTTCTCAAACTCAAGACTCTCATCAATGAGAAAAGAGATGATTTGATGAACACGGAGTCCGAAGGGTTCGACACGATCTTGGATGAGTTCGACAAGTTACACGTCCAAGTTGAGAAGCCGAGAGAGCAAGTTGCAGATGCAGAGGCACTGTTGGATCTAACACGCACTCTCGTGGAATCTGTCAAGTCTTTGACGAACGAGGGTGTATCCCCTTCTCAATTTGTTTCATCTCTGCTCATTCGCTACGCTCATGCTCATTCCCAACACTCTTTCGATTGGCAAAAACTTGGCCTCGCTGTCTCCCCATTCTTCCTCTCCGTTCATGGCTCTTCTACAATGCTTGGTCCCATGGACAACCAGTTTAAGCAACGCAAAACGGTAGTGCGCAGAAACCGTGATTCTCGCTCACTTTCTACTACTAGACCTCAACAGCTTGATGAGGCTGTTACCGAGGAAAAAACTGACACTGACAAAAACATGGCCACTATGTTTGGCATCTTAAGGAGGACAAAGCGTGTCCCGCTTCAAAACTTAATTTTGAACAGAATGTCTTTTGCTCAGACTGTGGAAAACTTGTTTGCTCTATCATTCCTAGTGAAAGATGGTCGTGCTGAGATTAATCTTGATGAAAATCGTTTGCACTATGTTTCACCTAAAAATGCTCCAGCTGCCAACTTGGTATCAACAAAAGAAGTTTCTTATACTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGTTGATGAAGGATTTGGTGCCTGATGGAAAAGAATTAATGCCACATCGAACTCAATTTTGCACTGTAGTTGCCTCTCAGGAAGGGATGGGTTGGGATGATTCCCAACCTGCTCTGGCTGTAACACCCATCAGGAAGCTATCACGGAATCGAGGTCTGGTTGTGCAGGAGGAAAGTGTTGTTGAAGAATCTCCTGAATGTGGTGAGGAAAATGCTTCCAGAGCAGGGGCAATGCGTAGGTGTAAGCGTAAGCTTCATTAA 1116 0.4561 MKGSRRSNDNIDNGDGDENVKRKAASEQNPATRRVIRSQFLKLKTLINEKRDDLMNTESEGFDTILDEFDKLHVQVEKPREQVADAEALLDLTRTLVESVKSLTNEGVSPSQFVSSLLIRYAHAHSQHSFDWQKLGLAVSPFFLSVHGSSTMLGPMDNQFKQRKTVVRRNRDSRSLSTTRPQQLDEAVTEEKTDTDKNMATMFGILRRTKRVPLQNLILNRMSFAQTVENLFALSFLVKDGRAEINLDENRLHYVSPKNAPAANLVSTKEVSYTHFVFRYDYQDWKLMKDLVPDGKELMPHRTQFCTVVASQEGMGWDDSQPALAVTPIRKLSRNRGLVVQEESVVEESPECGEENASRAGAMRRCKRKLH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1611 371 MobiDBLite consensus disorder prediction 163 193 - -
Aed1g1611 371 MobiDBLite consensus disorder prediction 1 31 - -
Aed1g1611 371 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 17 370 - -
Aed1g1611 371 MobiDBLite consensus disorder prediction 1 28 - -
Aed1g1611 371 MobiDBLite consensus disorder prediction 350 371 - -
Aed1g1611 371 Pfam Nse4 C-terminal 212 293 IPR014854 -
Aed1g1611 371 PANTHER UNCHARACTERIZED 17 370 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1611 Aed-Chr1 14230237 14232515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1611 33 370 Non-SMC Element family AT1G51130 50.575 2.05e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1611 K22825 - gmx:100792117 608.986