Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1594 ATGATCATAACGATGGACGAGGATCGGCGAGTGTATAGGGACGGGGGCATCGTGATTGAACAAGATAAAATCAAAGCTATCGGACAATCTAGTCATATCCTTGCCGAGTTTTCTCATGTGGCCGACCACATTGTTGATCTCACCGGCCATATCTTACTCCCTGGGTTTATTAACACCCACGTTCATAGTTCCCAACAACTTGCGAGAGGCATAGCCGACGATGTGGATTTAATGACCTGGTTGCATCACCGCATTTGGCCTTACGAATCCAACATGAGCGAGCACGATTCCTACCTCTCTACTTTGCTTTGTGGGATCGAACTCATTCACTCCGGTGTAACCTGTTTTGCGGAAGCTGGGGGCCAACATGTTTCTGGAATGGCTAGAGCAGTTGACTTACTGGGCTTGCGAGCTTGTTTAACCCAGTCAACCATGGACACTGGCCACGGTTTGCCAACATCCTGGGCCACTCGAACCACTCACCAATGTATTCAGTCTCAAAAGGATAATTATGACAAGTTCCACAATACAGCCCAAGGCCGAATCAGAATCTGGTTTGGGATTAGGCAAATCATGAACTCTACTCCTCGCTTGCTTACTGAAACAAGAGATGCTGCAACACAACTCAAAACTGGAATACACATGCATGTTGCCGAGATACCGTATGAGAATCAACTAGTCATGGATGTTCACAAAATAGATCACGGAACTGTTACATACTTGGAGAAGATAAATTTCCTTCAAAACAATCTGTTAGCAGCTCACTCAGTTTGGATCGATAATAATGAGATATCTCTTCTTTCAAGAGCAGGGGTCAAAGTGTCTCACTGTCCTGCTGCTGCAATGCGAATGCTTGGATTTGCACCTGTAAGGGAGATGCTTGATGCTGGCATCTGTGTCTCCCTGGGAACTGATGGGGCCCCATCAAACAATCGCATGAGCATCGTTGACGAAATGTACCTAGCTTCTCTAATTAACAAAGGTCGGGAAGTTTATGCTAATGGAACTACAGATCCAACTGCATTGCCTGCTGAAACTATGCTTAGAATGGTTACAGTTAATGGTGCAAAGTCTGTATTATGGGATGATGAACTAGGTTCTCTTGAGGTTGGGAAAAAGGCTGACATTGTTGTAGTCAATCCTTCAACTTGGTCTATGGTTCCTGTTCATGACTGCATTTCCAGCATAGTGTATTGCATGCGATCAGAAAATGTGGTTTCTGTCATGTGCAATGGGCTATGGATAATGAAGAACAAGAAGATTGTATATGTGGACGAGGTTATGCGGCGGGGGTATGGCGGTTGTTCTGGAATGGCAGTGAGTGTGAGAGGCGCAAGAATTGGAATTGGAAGGATTCGGGCGAGTTCTTCTTCTTCGGAGGAGGAAGAGGTGGCAAGTGTGCAGTCAAAAGTGACTCAGAAAGTATTCTTCGACATGAGTATTGGAAATCCAGTTGGGAAGCTTGTGGGACGGATTGTGATTGGACTGTACGGTGACGATGTCCCCCAGACAGCCGAGAACTTCCGTGCCCTTTGTACTGGAGAGAAGGGCTTTGGCTATAAGGGCTCCACCTTCCATCGTGTCATCAAGGATTTCATGATTCAAGGAGGAGACTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATATGGTCGTACTTTCAAAGATGAGAATTTTAATCTGTCTCACACTGGACCGGGAGTTGTTAGCATGGCAAATGCAGGTCCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGACACCTTGGCTGGATCAGAGGCATGTAGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTGATCGAATCACAGGAGACAGATAGGGGTGACCGTCCTAGAAAGAAGGTGACCATCAGTGACTGTGGTGACCTTCCAATTGCTTGA 1923 0.4576 MIITMDEDRRVYRDGGIVIEQDKIKAIGQSSHILAEFSHVADHIVDLTGHILLPGFINTHVHSSQQLARGIADDVDLMTWLHHRIWPYESNMSEHDSYLSTLLCGIELIHSGVTCFAEAGGQHVSGMARAVDLLGLRACLTQSTMDTGHGLPTSWATRTTHQCIQSQKDNYDKFHNTAQGRIRIWFGIRQIMNSTPRLLTETRDAATQLKTGIHMHVAEIPYENQLVMDVHKIDHGTVTYLEKINFLQNNLLAAHSVWIDNNEISLLSRAGVKVSHCPAAAMRMLGFAPVREMLDAGICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVYANGTTDPTALPAETMLRMVTVNGAKSVLWDDELGSLEVGKKADIVVVNPSTWSMVPVHDCISSIVYCMRSENVVSVMCNGLWIMKNKKIVYVDEVMRRGYGGCSGMAVSVRGARIGIGRIRASSSSSEEEEVASVQSKVTQKVFFDMSIGNPVGKLVGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFNLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVTISDCGDLPIA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1594 640 Gene3D - 459 639 IPR029000 -
Aed1g1594 640 PANTHER AMINOHYDROLASE SSNA-RELATED 2 426 - -
Aed1g1594 640 SUPERFAMILY Composite domain of metallo-dependent hydrolases 2 426 IPR011059 GO:0016810
Aed1g1594 640 CDD ATZ_TRZ_like 1 422 - -
Aed1g1594 640 PANTHER AMINOHYDROLASE SSNA-RELATED 2 426 - -
Aed1g1594 640 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 520 537 IPR020892 GO:0003755|GO:0006457
Aed1g1594 640 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 496 511 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 583 595 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 525 537 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 568 583 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 596 611 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 489 635 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 Gene3D Urease, subunit C, domain 1 1 426 IPR011059 GO:0016810
Aed1g1594 640 SUPERFAMILY Metallo-dependent hydrolases 54 367 IPR032466 -
Aed1g1594 640 Gene3D - 55 359 - -
Aed1g1594 640 SUPERFAMILY Cyclophilin-like 467 637 IPR029000 -
Aed1g1594 640 Pfam Amidohydrolase family 51 413 IPR006680 GO:0016787
Aed1g1594 640 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 486 636 IPR002130 GO:0000413|GO:0003755
Aed1g1594 640 CDD cyclophilin_ABH_like 474 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1594 Aed-Chr1 14100333 14108979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1594 451 631 U-box Gene Family AT5G67530 41.579 1.06e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1594 - - gmx:100500128 811.216