Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1592 ATGGGTTGTTTTTCGTGTTTCGATTCGAGGGAGGACGAGAAGCTGAATCCCAATCCTCAGCAGGAAAACCACCACCATCATCATGATCATGATCATGGTCATGATCTTAAGCCCCCTGTTCCTTCTCGTATTTCCAGATTGCCGCCCTCTGCCTCTGGACGCTCAACGACAAGTAATGTTAATGGTAACAATGGAGATTCCAAAAGGGAAAGGGAATTGGCTGCTCTCAAGGATGGACCTACTGTTCAAATTGCCGCTCAAATTTTCACTTTCCGTGAGGTTGCAGCTGCAACCAAAAACTTCAGGCCCCAATCCTTTTTGGGGGAAGGTGGTTTCGGAAGGGTTTACAAGGGCCGCCTTGAAACCACCGGTCAGGTTGTGGCTGTTAAACAGTTAGACAGAAACGGTCTTCAGGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTGAATCTTATTGGATACTGTGCGGATGGGGACCAACGCCTCTTAGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCGGGTAAGGAACCATTAGATTGGAACATTAGGATGAAAATAGCTGCCGGGGCAGCTAAAGGATTGGAATACCTTCACGACAAAGCAAATCCTCCGGTCATTTATAGAGACTTCAAATCATCTAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCAGACTTTGGCCTTGCAAAGCTTGGTCCAGTTGGTGACAAATCACACGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCCCCAGAATATGCAATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCGACCCCATGGAGAACAAAACCTTGTGACATGGGCACGTCCACTGTTCAATGACCGCAGGAAATTTCCAAAGTTAGCAGATCCAGAGCTGCAGGGACGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCTGCAGCACGTCCTCTGATTGGGGATGTGGTGACAGCGCTTTCTTTTCTAGCTAACCAGGCATATGACCATAGGGGAGCAGGTGATGATAAAAGAGGGGGAAGAATATTGAAAAATGATGAAGGTGGAGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGACGAGTCCCCACGTGAAACTGCAAGGATATTAAACAACAGGGATATTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATGTGGGGTGAGAACTGGAGAGAAAAAAGACGACAAAGTGCGCAGGGCAGTTTTGATGGTTCTAATGCTTAG 1404 0.4687 MGCFSCFDSREDEKLNPNPQQENHHHHHDHDHGHDLKPPVPSRISRLPPSASGRSTTSNVNGNNGDSKRERELAALKDGPTVQIAAQIFTFREVAAATKNFRPQSFLGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPGKEPLDWNIRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFPKLADPELQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDHRGAGDDKRGGRILKNDEGGGGSGRRWDLEGSEKDESPRETARILNNRDIDRERAVAEAKMWGENWREKRRQSAQGSFDGSNA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1592 467 MobiDBLite consensus disorder prediction 1 67 - -
Aed1g1592 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Aed1g1592 467 Gene3D Transferase(Phosphotransferase) domain 1 178 394 - -
Aed1g1592 467 Gene3D Phosphorylase Kinase; domain 1 86 177 - -
Aed1g1592 467 MobiDBLite consensus disorder prediction 388 434 - -
Aed1g1592 467 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 462 - -
Aed1g1592 467 SUPERFAMILY Protein kinase-like (PK-like) 82 377 IPR011009 -
Aed1g1592 467 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Aed1g1592 467 MobiDBLite consensus disorder prediction 7 39 - -
Aed1g1592 467 CDD STKc_IRAK 107 375 - -
Aed1g1592 467 Pfam Protein kinase domain 104 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1592 467 MobiDBLite consensus disorder prediction 48 64 - -
Aed1g1592 467 PANTHER OS07G0668900 PROTEIN 1 462 - -
Aed1g1592 467 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1592 Aed-Chr1 14084297 14089562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1592 1 455 Glycoside Hydrolase AT3G07070 56.484 2.17e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed1g1592 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1592 K13430 - gmx:100777987 836.639