Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1589 ATGGCTTTAGAGCAGGAATTATCGCTGGGTCAGAATAGGAACACAAACGGCGTGGACGGTGGAGAGGAGGGAGGGAAAGCGCCGAGATTGCCTCGGTGGACAAGACAAGAAATTCTGGTATTGATACAGGGAAAGAGAGACGCGGAGAACAAGTTCAGGAGGGGTCGCACTGCGGGATTGCCATTCGGGTCGGGTCAGGTAGAGCCCAAATGGGCCTCGGTATCTTCCTACTGCAGAAAGCATGGAGTGAACAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAGGAATGGGAGTCTCAGATAAGGGAGGAGACGGATTCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGAGAAGAAATTGCCCGGATTTTTCGACAAGGAGGTCTATGATATTCTTGATTCAGGCTCAACACCAACGGCCTTGGCTCTTGCTCCTTCCTCGCCTCCAGCACCCACACCCACACCCACACCCAAAACAACAGTCCCTGATGAGCCTCACCTCTATGATAGTAATCGGAGCGCGCCAGTTGAGGATGGCTTGTTCTCAGATTGTGAACAAGATGAAGTCCCTGCTGCCAGTCCTCCTGAGAAGAAGAACGTTTTGCCGCCCTCCATCAAGGACATTCCTGCTCCCGTTCCTATCTCAGAGAAGCAATATCAACCACTCCTCCGTGGATGCCAAGCTGAAGGTGTGACTAACGAGAAACATTCTACTTCAAATCCAGAAAAGGGTTCTACATCTCAAGGAGAGCGGAAAAGGAAGCGGTTAGGAACTGACGGAGAGGAGGAAACTATGCAATATCAATTAATTGATGTCTTAGAAAGAAATGGCAAGATGCTAAGTGCTCAACTTGAAGCGCAGAATATAAATTTCCAGTTGGATCGTGAGCAGCGGAAAGACCATGCAAGTAATTTGGTTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTATAG 1005 0.4896 MALEQELSLGQNRNTNGVDGGEEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREETDSFWVMRNDLRREKKLPGFFDKEVYDILDSGSTPTALALAPSSPPAPTPTPTPKTTVPDEPHLYDSNRSAPVEDGLFSDCEQDEVPAASPPEKKNVLPPSIKDIPAPVPISEKQYQPLLRGCQAEGVTNEKHSTSNPEKGSTSQGERKRKRLGTDGEEETMQYQLIDVLERNGKMLSAQLEAQNINFQLDREQRKDHASNLVAVLDKLADALGRIADKL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1589 334 ProSiteProfiles Myb-like domain profile. 32 98 IPR001005 -
Aed1g1589 334 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 11 334 - -
Aed1g1589 334 MobiDBLite consensus disorder prediction 257 272 - -
Aed1g1589 334 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 11 334 - -
Aed1g1589 334 MobiDBLite consensus disorder prediction 1 31 - -
Aed1g1589 334 CDD GT1 31 105 - -
Aed1g1589 334 MobiDBLite consensus disorder prediction 242 256 - -
Aed1g1589 334 MobiDBLite consensus disorder prediction 236 273 - -
Aed1g1589 334 Pfam Myb/SANT-like DNA-binding domain 32 121 IPR044822 -
Aed1g1589 334 Gene3D - 33 103 - -
Aed1g1589 334 MobiDBLite consensus disorder prediction 155 171 - -
Aed1g1589 334 MobiDBLite consensus disorder prediction 148 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1589 Aed-Chr1 14057165 14062386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1589 1 106 Trihelix Transcription Factor Family AT1G76890 25.472 3.80e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed1g1589 Myb_DNA-bind_4 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1589 - - gmx:100779050 524.242