Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1575 ATGATGGGTTCGGTAGTAGAGGACGACAAGATAGAGCAGCAGCAACACCGTATAGATTTTGACGACGACGACGACGACGACGACGACGATACTCCCTTCTCTAAAGTCCACAGCTCTACCTTCAATTTCGAGACCACAAGCGTTGTAGATTTGCGGATTCGGAGCTCATCCGTCTTTAAAACACGTATCAGCAGGAGTATTTATTTTGTCTTAATTAAAGCCAAGATCAACCTCTTGCTTCCCTTTGGTCCATTAGCCATTCTCCTACATTACCTAACTGGACACCATGGATTGGTCTTCTTCTTCACCTTATTGGGGATTGCTCCTTTGGCAGAACGTCTCGGTTATGCTACCGAGCAGCTTGCCTTCTTCACAGGACCAACAGTTGGTGGTCTTCTTAATGCCACATTTGGCAATGCAACTGAAATGATTATATCTATTTATGCATTGAAAAGCAACATGATAAGGGTTGTTCAGCAATCTTTACTTGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGCTGTGCATTCTTTACTGGTGGCATTGTCCACTACAAAAAAGTACAGCTTTTTGATAAGGCAGCTGCTGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATACTATTTCCTGCTGTGCTTTACTTTACTCACTCTGAAGTTCATCAAGGGAAGTCAGTGTTGTCTCTTTCCAGATTTAGCAGCTGCATAATGCTAGTGGCCTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAAAATGTTTATAGTCCGGTTGACGAGGAAGGAGATAATGGTGAAAATTCTGATGAGGAGGAAGAACTTGAATTATCTAAATGGGAGGCAATAATCTGGCTTGCTATTTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGACGCCATACAGGGAGCATCTAAGTCATTGAATATGTCAGTGGCTTTTATTTCTGTCATCCTGCTTCCAATTGTAGGCAATGCTGCAGAACATGCCAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTGATATTACTATTGGAGTTGCTATTGGATCATCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGTTAGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTATTCTTTGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACATGTTGACCCTAAAAGTGGGCCTTTTGTAATGCTGTTTGTGGAATATGGTACAGGTGATGACTAA 1356 0.4115 MMGSVVEDDKIEQQQHRIDFDDDDDDDDDDTPFSKVHSSTFNFETTSVVDLRIRSSSVFKTRISRSIYFVLIKAKINLLLPFGPLAILLHYLTGHHGLVFFFTLLGIAPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQLFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHQGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNVYSPVDEEGDNGENSDEEEELELSKWEAIIWLAILTAWVSILSGYLVDAIQGASKSLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGPFVMLFVEYGTGDD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1575 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 28 437 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aed1g1575 451 PANTHER VACUOLAR CATION/PROTON EXCHANGER 28 437 - -
Aed1g1575 451 MobiDBLite consensus disorder prediction 1 33 - -
Aed1g1575 451 TIGRFAM cax: calcium/proton exchanger 79 429 IPR004798 GO:0006816|GO:0015369
Aed1g1575 451 Gene3D - 274 430 IPR044880 -
Aed1g1575 451 Gene3D - 127 263 IPR044880 -
Aed1g1575 451 TIGRFAM caca2: calcium/proton exchanger 70 429 - -
Aed1g1575 451 Pfam Sodium/calcium exchanger protein 287 426 IPR004837 GO:0016021|GO:0055085
Aed1g1575 451 Pfam Sodium/calcium exchanger protein 98 253 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1575 Aed-Chr1 13942567 13949421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1575 60 434 Antiporters AT3G13320 76.064 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1575 K07300 - gmx:100806000 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1575 1 13942567 13949421 Aed1g1575 1 13942567 13949421 ECH