Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1573 ATGGCTGTTGAAAGCAGCAGGGAATTAATTTACAGGTCGAAGCTTCCGGATATCGACATACCAAAAGAGGTTCCCCTCCACTCATACTGCTTTGAGAATTTGAGGGAGTACGGATCACGGCCCTGCTTGATCAATGCCCCGACGGGTGTCGTGTACAGCTACGAGGAGGTGGAGAGCAGAGCCCGAAAAGTGGGGTGGGGGCTTCAGAAATTACTGGGCGTGAAACAGGGAGAGGTGATAATGATCCTCCTCCCGAATTGCCCCGAATTCGTCTTGTCTTTTCTGGGGGCGTCGTATCGAGGTGCCATGGCCACTGCTGCAAATCCATTCTTTACCTCGGCGGAGATTGCAAAGCAAGCCAAGGCCTCCAATGCCAAGGTGGTCATAACGCAGGCATCCTACTACGATAAAGTGAAGGAGCTGGTGCTGGAGCAGCACGTCAAACTTGTATTCGTGGACTCCTGTCCGATCTCTGATGATTTACATTTTCATTTTCATTTCACACAGCTGTATGACATGGACATGGACATGGACATGGAGGAGAAGAAAATCATGATCAAACCAGATGATGTTGTTGCTTTGCCTTACTCTTCCGGAACAACCGGGCTTCCCAAGGGAGTTATGCTTACACACAAGGGACTTGTGACCAGCATTGCTCAGCAGGTGGACGGTGATAACCCCAACCTCTATTACCACTACGAGGATATCATCCTCTGCGTGCTTCCCCTCTTTCACATTTACTCTCTCAACTCTGTTTTGCTCTGCGGCTTGCGTTCCAAGGCCACCATTCTCCTTATGCCCAAGTTCGAAATTAACGCCTTGCTTTCTCTCATACACAAACACAAGGTCACTATTGCCCCTGTTGTCCCACCCATTGTTCTCGCCATTTCCAAGTCACCCCATCTCAATGACTACGACCTCTCCTCCATCAGAGTTCTCAAGTCCGGCGGAGCCCCTCTCGGTAAAGAACTCGAACACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGGGATACGGAATGACTGAGGCAGGTCCAGTGCTAACAATGTCTTTAGCATTTGCTAAAGAACCTATAGATGTAAAAGCAGGTGCATGTGGAACAGTTGTAAGAAATGCAGAGATGAAGATAGTTGATCCTGAAACCGGTTATTCATTACCTCGAAACAAGTCGGGTGAAATTTGCATAAGAGGCGACCAGATAATGAAAGGGTATCTAAATGATCAAGAGGCTACGGAGAGAACCATAGACAAAGATGGTTGGTTGCACACAGGTGACATCGGATATATCGACGATGACGATGAGTTATTCATCGTTGATAGGCTCAAGGAATTGATCAAATACAAGGGATTTCAAGTCGCTCCAGCTGAACTTGAGGCCCTTCTTCTCACTCATCCTAACATTTCTGATGCTGCTGTCGTTCCCATGAAGGATCAAGCTGCCGGAGAGGTACCTGTTGCATTTGTTGTCGTATCAACTGACACTACCCAGGATGAAATTAAGAACTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCTGGCAAAATCTTGCGTAAGGATCTAAGAGCAAAGCTAGCAGCACCTGCTCCAAATTAA 1647 0.4724 MAVESSRELIYRSKLPDIDIPKEVPLHSYCFENLREYGSRPCLINAPTGVVYSYEEVESRARKVGWGLQKLLGVKQGEVIMILLPNCPEFVLSFLGASYRGAMATAANPFFTSAEIAKQAKASNAKVVITQASYYDKVKELVLEQHVKLVFVDSCPISDDLHFHFHFTQLYDMDMDMDMEEKKIMIKPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGDNPNLYYHYEDIILCVLPLFHIYSLNSVLLCGLRSKATILLMPKFEINALLSLIHKHKVTIAPVVPPIVLAISKSPHLNDYDLSSIRVLKSGGAPLGKELEHTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEPIDVKAGACGTVVRNAEMKIVDPETGYSLPRNKSGEICIRGDQIMKGYLNDQEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPNISDAAVVPMKDQAAGEVPVAFVVVSTDTTQDEIKNFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAPAPN 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1573 548 Pfam AMP-binding enzyme 32 450 IPR000873 -
Aed1g1573 548 Gene3D - 446 544 IPR045851 -
Aed1g1573 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 543 - -
Aed1g1573 548 CDD 4CL 20 538 - -
Aed1g1573 548 SUPERFAMILY Acetyl-CoA synthetase-like 7 544 - -
Aed1g1573 548 Gene3D - 8 445 IPR042099 -
Aed1g1573 548 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 5 543 - -
Aed1g1573 548 Pfam AMP-binding enzyme C-terminal domain 459 532 IPR025110 -
Aed1g1573 548 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1573 Aed-Chr1 13938356 13940395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1573 5 510 Monolignol Biosynthesis Gene Families AT1G51680 68.297 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1573 K01904 - gmx:547944 901.738