Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1568 ATGGATAAAGTGCTGTGTCTGAACAGTGAGGCTTCTCCTGCTCCTGCTCCTGCGGTTGGAATGGAATTTGACAGTTACGAGGATGTGTATTACTTGTATAATTGGTACGCGAAAGAACAGGGATTTGGAGTTAGGGTGACAAATACCTGGTACCGCAAGTCTAAGGAACGCTACAGAGCTAAACTTAGCTGCAGCAGTGCTGGGTTTAAGAAGAGAACTGAAGCCAATCGCCCCAGACCTGAAACCAGAACCGGTTGTCCTGCTATGATCAAGTTCAGGTTGATGGACTCCTCCACAAGATGGAGAATTGTTGAAGTTGAGCTTCACCACAATCACTTGATCAACCCCACCACTCCAATGTTTTACAAGTCCCACTCCCACAAGCAAATGCAAATTTCCCTTGGGACCAAAAGAACCTTCCAACAGCTTCACAATATTACAACTGTCATAATTGATGATGCTGATGCTCAAGGGAATTCCCCTAAAGGCCTCTACCCCAATCAGTTGAACCTCAAGAAAGATTTGGACTCAAAGTCTTCTAGCTTTGTAGCAAAATCAAGGTCTTACTTTGAGTTGCAGGTTTCAAAGTTATACACCAATGAAATATTAAGAATGTTTGAAAGGGAAGTGGAAGGGATGTTCTCTTGCTTTAACTCCAGACAGATAAATGTTGATGGACCAGTCATCACATACATTGTCCAGGAACAAGTTGAGGGAAATCAGAGAGATGCAAAAGATTACGAGGTGTGTTATAATGAAGCTGAAATGGAGGTCCTTTGCATCTGTGGTTTGTTCAATTTTAGAGGTTACTTGTGCAGGCATGCTTTGTTTATCTTAAGTCAAAATGGAATAAAAGAGATCCCAGCTCAGTACATTCTTTCACGATGGAGAAAAGATATGAAGCGTAGCAATTTTTATGATCACAACGGTAGTGGTATTGATATTAGTAATCCAGTTCATAGGTATGACCATTTATACAGACAGATTGTGAAGGTTGTAGAGGAAGGTAAGAAATCTCATGATCATTACAGGACTGCAGTACAAGCATTGGAGAATATATTTACCAAGCTTCATCTTGTTGTAAACGTTGATGACCCAATATAA 1104 0.4085 MDKVLCLNSEASPAPAPAVGMEFDSYEDVYYLYNWYAKEQGFGVRVTNTWYRKSKERYRAKLSCSSAGFKKRTEANRPRPETRTGCPAMIKFRLMDSSTRWRIVEVELHHNHLINPTTPMFYKSHSHKQMQISLGTKRTFQQLHNITTVIIDDADAQGNSPKGLYPNQLNLKKDLDSKSSSFVAKSRSYFELQVSKLYTNEILRMFEREVEGMFSCFNSRQINVDGPVITYIVQEQVEGNQRDAKDYEVCYNEAEMEVLCICGLFNFRGYLCRHALFILSQNGIKEIPAQYILSRWRKDMKRSNFYDHNGSGIDISNPVHRYDHLYRQIVKVVEEGKKSHDHYRTAVQALENIFTKLHLVVNVDDPI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1568 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 14 149 - -
Aed1g1568 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 173 361 - -
Aed1g1568 367 SMART 26again6 258 285 IPR006564 GO:0008270
Aed1g1568 367 Pfam FAR1 DNA-binding domain 32 115 IPR004330 -
Aed1g1568 367 ProSiteProfiles Zinc finger SWIM-type profile. 247 283 IPR007527 GO:0008270
Aed1g1568 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 149 IPR031052 GO:0006355
Aed1g1568 367 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 173 361 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1568 Aed-Chr1 13901492 13903390 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed1g1568 FAR1 2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1568 - K17604 gmx:100796267 350.517