Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1565 GCCCCCTCATCACTTGTTTTGTTTTTAGTATTCTCAACGCCCCAAGTGCAGTGCTGTGCCGTGTGGGGGAAGGAAGTATCTCAGTTCTCAACGTACAACATGGTTTTCTTACAAACCTTGTTCTTCCAGGTTTTACTTTTTGTAACAACAACATTTGGTCGTGAAACCTTAACTCCAAGGAACCCTTCTCATTCTCTACTCACTGATAAAGCTGCTCTTCTGGAATTCAGGAAAGCAATCATATCAGACCCGCATTCCTCACTTAGCAACTGGGATGAAGCTGTTCATGTGTGCAACTTCACGGGTGTTGCATGTGACAAATTCCATAACCGTGTTACACGACTAATCCTATATGATAAAGCTCTAGTGGGGCTTCTTTCACCTGTTCTTTCAAATCTCACTGGACTGCACGACCTTGAGATTGTTGGAAGTCACTTATTTGGCATTATTCCACCTGAATTTTCAAACCTCAGACGGCTTCACATCATGAGTCTTGAGGGGAATGATTTGCACGGATCAATACCAGAGTCATTTTCCATGCTTTCCAAGCTTAACATCTTGACCATTAAGGAAAATAATAACATATCAGGTTCACTTCCTCCATCTCTCTTTTCCAACTGCACTCTGCTAGACGTTGTGGACTTTTCCAGCAACTCATTAACTGGTCAAATCCCACAAGAGATTGGAAACTGCCAAGGCCTCTGGAGTATCAGTTTATACAATAATCAATTTACTGGCCAACTTCCTCTCTCACTCACCAATCTAACGCTTCAAAATTTGGACGTGGAGTTCAATTATCTGTTTGGTGAATTGCCTTCAAAGTTTGTAAGCAGCTGGCCAAATCTTATTTACCTTCATTTATCATACAACAATATGGTAAGCCATGATAACAATACCAATCTTGATCCATTTTTCACTGCTCTCGGTAACAACACTAGTCTAAAGGAGCTTGAATTGGCAGGAATGGGGCTTGGGGGAAGCTTCACCAATACTGTGGCCAGCCAACTCACCAGTCTTAGAACCCTTCTCCTTCAGGAAAACCAAATTTTTGGATCAATTCCTCGCAGCTTAGCAAACCTTTCAAGGCTTTTCATTCTCAATTTAACATCCAATCTTCTAAATGGGACTATATCCTCTGATATCTTCTTTAGACTCCCAAAGTTGGAACAACTTTCCTTATCACACAACCTTTTCAAAACCTCAATTCCAGACGCAATAGGCAAGTGTCTTAATCTGGGTCTACTGGATCTGTCACACAATCAATTCTCAGGTAGGATTCCAGACAGCTTGGGAAATTTGGTTAGACTAAATTCTTTGTTTCTCAACAATAACCTTCTCTCAGGAACAATACCTCCCACATTGGGACGGTGTTCTAATCTGTACAGGCTTGACTTGTCCCATAATAGATTAACAGGAAGCATACCACTGGGATTGGCAGGCTTGCGCGAGATCAGAATTTTCATAAATGTCTCTCATAACCACCTTGAAGGTCCCCTTCCAATTGAGCTCAGCAAACTAGAAAAGGTTCAGGAGATAGATCTTTCATCCAATTACCTAACTGGAACTATCTTCCCACAGATGGCAGGATGCATTGCTGTTTCAATGATTAACTTTTCAAACAATTCTCTTCAAGGTGAGCTCCCACAGTCTCTTGGTGATCTCAAGAACCTCGAATCTTTTGATGTTTCAAGAAACCAGTTATCTGGATCGATACCGGCAACACTTGGTAAAATTGATACACTCACTTTTCTCAATTTATCATTTAACAATCTGGAAGGAAAGATTCCATCTGGTGGTATCTTTAATTCAGTTTCAAACTTGTCATTCTTAGAAAATCCACAACTTTGTGGAACAATTGAAGGCATATCCTTGTGCTCTCAAAGGAAAAAATGGTTTCACACTCGTTTGTTATTGATTATATTCATTTTGGTCATCTTCATATCAACATTGTTGTCAATAATTTGCTGTGTATTTGGTTGCAAGCGTCTTAAAGTAATCGTCAGCTCTCAGAGGACTGAGGCAAGCAAAAATGCAACTAGACCTGAGTTGATTAGTAACTTCCCAAGAATCACGTATAAGGAACTTTCAAATGCCACTGGAGGATTTGACGATCAGAGACTTGTTGGATCAGGTAGTTATGGACATGTCTACAGGGGTGTTCTCACGGAAGGGACACCAATAGCGGTCAAGGTGCTGCATTTACAATCTGGAAATTCTACCAAGAGCTTTAACAGAGAATGTCAAGTTTTGAAGAGAATTAGACACAGAAACCTGATAAGGATTATCACAGCATGTTGCCTACCTGATTTTAAGGCTCTTGTTCTACCTTATATGGCCAATGGGAGCTTGGAGAGACGCCTCTATCCTTCTTGCAGATCATCAGACTTGAGTATTGTCCAGAGGGTGAATGTTTGCAGTGATGTAGCTGAAGGGATGGCCTATTTGCATCACCATTCTCCTGTTAGAGTCATACATTGTGATCTAAAACCAAGCAATATTCTTCTCAATGATGACATGACAGCTCTCGTTTCTGATTTTGGGGTTGCAAGGCTAATTATGAGTGTTGGAGGTGGGGCTATTGATAACATGGGCAACTCTAGTGCAAATTTGTTCTGTGGATCCATTGGATACATTGCACCAGAATATGGATTTGGATCCAATACATCAACCAAAGGAGATGTCTACAGCTTTGGCATTCTAGTTCTTGAGATGGTGACTAGAAGAAGACCAACAGATGAGATGTTTGTTGGTGGGTTAAGTCTTCACAAATGGGTAAAGAATCATTTTCATGGAAGGGTGGAAAAGGTGGTAGATCCTGCTTTGGTGACAGCTTCAATAGAACAATCCAGAGAGGTTAGAAAGATGTGGGAAGTTGCTATTGCGGAGTTAATTGAGTTGGGACTTGTTTGCACACAGGAGTCACCTTTGACAAGACCAACAATGCTTGATGCAGCAGATGACTTAAACCGTCTCAAGAGATACCTTAATGGGGACACAACAGGAACTTTTGCCTCGTCACTGGGAATTTCATCTTCCACTATAGGTGACTTCTACAGTTCTACTTCTATTGAGCCCAATGGCAGTAATGTATGA 3093 0.4103 APSSLVLFLVFSTPQVQCCAVWGKEVSQFSTYNMVFLQTLFFQVLLFVTTTFGRETLTPRNPSHSLLTDKAALLEFRKAIISDPHSSLSNWDEAVHVCNFTGVACDKFHNRVTRLILYDKALVGLLSPVLSNLTGLHDLEIVGSHLFGIIPPEFSNLRRLHIMSLEGNDLHGSIPESFSMLSKLNILTIKENNNISGSLPPSLFSNCTLLDVVDFSSNSLTGQIPQEIGNCQGLWSISLYNNQFTGQLPLSLTNLTLQNLDVEFNYLFGELPSKFVSSWPNLIYLHLSYNNMVSHDNNTNLDPFFTALGNNTSLKELELAGMGLGGSFTNTVASQLTSLRTLLLQENQIFGSIPRSLANLSRLFILNLTSNLLNGTISSDIFFRLPKLEQLSLSHNLFKTSIPDAIGKCLNLGLLDLSHNQFSGRIPDSLGNLVRLNSLFLNNNLLSGTIPPTLGRCSNLYRLDLSHNRLTGSIPLGLAGLREIRIFINVSHNHLEGPLPIELSKLEKVQEIDLSSNYLTGTIFPQMAGCIAVSMINFSNNSLQGELPQSLGDLKNLESFDVSRNQLSGSIPATLGKIDTLTFLNLSFNNLEGKIPSGGIFNSVSNLSFLENPQLCGTIEGISLCSQRKKWFHTRLLLIIFILVIFISTLLSIICCVFGCKRLKVIVSSQRTEASKNATRPELISNFPRITYKELSNATGGFDDQRLVGSGSYGHVYRGVLTEGTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACCLPDFKALVLPYMANGSLERRLYPSCRSSDLSIVQRVNVCSDVAEGMAYLHHHSPVRVIHCDLKPSNILLNDDMTALVSDFGVARLIMSVGGGAIDNMGNSSANLFCGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDEMFVGGLSLHKWVKNHFHGRVEKVVDPALVTASIEQSREVRKMWEVAIAELIELGLVCTQESPLTRPTMLDAADDLNRLKRYLNGDTTGTFASSLGISSSTIGDFYSSTSIEPNGSNV 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1565 1030 SMART LRR_typ_2 336 359 IPR003591 -
Aed1g1565 1030 SMART LRR_typ_2 433 457 IPR003591 -
Aed1g1565 1030 SMART LRR_typ_2 360 384 IPR003591 -
Aed1g1565 1030 SMART LRR_typ_2 385 409 IPR003591 -
Aed1g1565 1030 SMART LRR_typ_2 554 577 IPR003591 -
Aed1g1565 1030 ProSiteProfiles Protein kinase domain profile. 702 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1565 1030 Pfam Leucine rich repeat 377 422 IPR001611 GO:0005515
Aed1g1565 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Aed1g1565 1030 ProSiteProfiles Leucine-rich repeat profile. 459 482 IPR001611 GO:0005515
Aed1g1565 1030 Gene3D Ribonuclease Inhibitor 257 631 IPR032675 -
Aed1g1565 1030 Pfam Leucine rich repeat N-terminal domain 68 106 IPR013210 -
Aed1g1565 1030 CDD STKc_IRAK 708 991 - -
Aed1g1565 1030 ProSitePatterns Protein kinases ATP-binding region signature. 708 730 IPR017441 GO:0005524
Aed1g1565 1030 SMART serkin_6 702 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1565 1030 PANTHER OS06G0186100 PROTEIN 57 998 - -
Aed1g1565 1030 Gene3D Ribonuclease Inhibitor 68 184 IPR032675 -
Aed1g1565 1030 Gene3D Ribonuclease Inhibitor 185 256 IPR032675 -
Aed1g1565 1030 Gene3D Phosphorylase Kinase; domain 1 683 777 - -
Aed1g1565 1030 SUPERFAMILY Protein kinase-like (PK-like) 679 988 IPR011009 -
Aed1g1565 1030 PANTHER OS04G0122200 PROTEIN 57 998 - -
Aed1g1565 1030 Pfam Protein kinase domain 703 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1565 1030 SUPERFAMILY L domain-like 358 617 - -
Aed1g1565 1030 Gene3D Transferase(Phosphotransferase) domain 1 778 1002 - -
Aed1g1565 1030 SUPERFAMILY L domain-like 95 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1565 Aed-Chr1 13881492 13884733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1565 68 978 Receptor kinase-like Gene Family AT3G47570 35.318 3.16e-165 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aed1g1565 Pkinase 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1565 - - gmx:100815766 1734.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1565 1 13881492 13884733 Aed1g1565 1 13881492 13884733 ECH