Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1564 ATGATAGAGATGTTGATCAAGGTGAAGCAATCCACAATGGTGCGGCCGGCGGTGGAGACGCCGCCGAGGGCACTGTGGAACTCCAACGTTGATTTGGTGGTGCCTAATTTCCACACGCCGAGCGTGTATTTCTATAGGCCAAACCCAAACGAGGCCTCGAATTTCTTCGATGCGAAGGTGATGAAGGATGCTCTGAGCAAGGCCCTGGTCCCTTTCTACCCAATGGCAGCCCGCCTCCGCCGCGACGACGACGGCCGCGTCGAGATTTACTGCGACGGTCAGGGCGTACTCTTCGTGGAGGCTGAGACCACCGCAGCCATCGACGACTTCGGCGACTTCGCTCCCACCCTCCAGCTCCGTCAGCTCATCCCCTCCGTCGATTATTCACCCGGTATCCAAACTTATCCGCTGTTGGTGCTACAGGTAACATATTTCAAATGTGGAGGAGTCTCATTAGGAGTTGGTATGCAACACCATGTAGCAGATGGAGCATCTGGTCTTCACTTTATAAATGCATGGTCAGATTTTGCTCGTGGCTTGGATATTTCACTCCCCCCATTCATTGACAGGACACTACTCCGTGCCACGGATCCACCTCGTCCTGTTTTTGAACACATTGAGTACAAGCCCCCACCAGCCATGAAGACGACTCCAACCCTGCAATCCTCAAAACCAGGTTCCGAGTCTGTGTCCGTCTCTAATTTGAAATTGACTCGTGACCAACTGAGCACCCTCAAGGGTAAGTACAGAGAAGAAGGAAACACAATCACCTATAGCTCTTATGAGATGTTGGCAGGTCATGTATGGCGAAGTGTGTGCAAGGCAAGAGCACTTCCTGATGACCAAGAAACCAAATTGTACATTGCTACCGATGGAAGGGCAAGGCTGCGACCTCCCCTCCCCCCAGGTTACTTTGGCAATGTCATCTTCACCGCCACTCCTGTAGCAGTGGCTGGTCATCTAATGTCAAAACCAACATGGTATGCTGCAAGCAGGATTCACGATGCATTAACAAGAATGGACAACGAATATTTGAGATCGGCTCTTGACTTTCTAGAGCTGCAGCCTGATCTAAAAGCTCTTGTTCGTGGAGCACATACTTTTAGGTGTCCAAATCTTGGTATAACTAGCTGGGTAAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGACCCATTTTCATGGGACCTGGTGGGATTGCATATGAGGGCCTATCTTTCATAATTCCAAGCTCAACAAATGATGGGAGCATGTCTGTGGCAATCGCTCTGCCGCCTGACCAAATCAAAGTGTTTCAGGATTTGTTTTATGACATTTGA 1323 0.5011 MIEMLIKVKQSTMVRPAVETPPRALWNSNVDLVVPNFHTPSVYFYRPNPNEASNFFDAKVMKDALSKALVPFYPMAARLRRDDDGRVEIYCDGQGVLFVEAETTAAIDDFGDFAPTLQLRQLIPSVDYSPGIQTYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINAWSDFARGLDISLPPFIDRTLLRATDPPRPVFEHIEYKPPPAMKTTPTLQSSKPGSESVSVSNLKLTRDQLSTLKGKYREEGNTITYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRARLRPPLPPGYFGNVIFTATPVAVAGHLMSKPTWYAASRIHDALTRMDNEYLRSALDFLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAIALPPDQIKVFQDLFYDI 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1564 440 Pfam Transferase family 6 438 - -
Aed1g1564 440 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 7 439 - -
Aed1g1564 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 439 - -
Aed1g1564 440 Gene3D - 219 440 IPR023213 -
Aed1g1564 440 MobiDBLite consensus disorder prediction 215 233 - -
Aed1g1564 440 MobiDBLite consensus disorder prediction 206 233 - -
Aed1g1564 440 Gene3D - 1 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1564 Aed-Chr1 13876483 13879705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1564 4 440 Monolignol Biosynthesis Gene Families AT5G48930 74.600 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1564 K13065 - gmx:100801923 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1564 1 13876483 13879705 Aed1g1564 1 13876483 13879705 ECH
Aed1g1564 1 13876483 13879705 Aed2g0053 2 422035 426586 PCT