Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1563 ATGGCAGATCTCAAGGAGAGGCTACTACCACCAAAACCTGCATCAGCTCTTAATGTAAGAGAGGCTGCCAATCGACCATCTGCCTCTGGAAGGCAAGCTTTCCAAGGGGTGGATGTTTTAGGGCTAAAGAAGCGAGGCCAAGGTCTCCGGACATGGATTCGTGTTGACACATCTGGAAACTCTCAGGCCATTGAGGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCTGCACGTGATCTTCGCCTACTTGATCCTCTGTTTGTCTACCCATCAACAATCCTTGGTAGGGAAAAAGCTATTGTTGTAAATCTAGAGCAGATACGGTGTATCATTACAGCAGACGAGGTTCTTCTCTTGAATTCCCTTGATAGTTGTGTGCTGCGCTATGTAATGGAACTGCAACGACGGTTGACAACAACTGGGGTAGGGGAGGTTTGGCAATCAGATAGTTCTGACATGAACCGAAGGAGAGGAAGTAGGAATTTTGAAAATGTATTTAGCAACTCTTCCCCTGATTATTTACCTTTTGAGTTTAGGGCTCTTGAAGTTGCCCTCGAGGCGGCATGTGCATTTCTTGATGACCAGGCAGCAGAGTTAGAAATAGAGGCTTATCCATTGTTGGATGAACTGACATCAAAGATCAGTACACTAAATTTAGAACGTGTTCGTCGGTTGAAGAGCAGACTTGTTGCCCTGACCAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGACGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGGCGAATGGAGTTGTCATTTTATGGAGAGCAGTCTATGGTTGGATATAAATCAGTTGATGGTGCATCCATTTCTGCTCCGGTCTCTCCTGTTTCATCACCTCCTGATTCTCGGAAGCTTGAAAAGAGTTTTAGCATTGCTAGGAGTCGACATGAGAGCATGAGGAGTTCTGAAAGTACTACGGAAAGTATAGAAGAGCTTGAGATGTTACTGGAAGCTTACTTTGTTGTCATTGATAGCACTCTAAACAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATTCAACTGGATAATGTGCGAAATCAGCTTATCCAGTTTGAGCTTTTACTCACGACTGCAACATTTGTGGTAGCCATCTTTGGAGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTGAATTATTTGATGTCCCCTCTGCTTTCCAGTGGGTCCTTATAATAACAGGAGTTTGTGGAGTCTGCATATTTTCTGCATTTGTGTGGTTCTTCAAGTATAGAAGACTCATGCCCCTATAG 1332 0.4317 MADLKERLLPPKPASALNVREAANRPSASGRQAFQGVDVLGLKKRGQGLRTWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSCVLRYVMELQRRLTTTGVGEVWQSDSSDMNRRRGSRNFENVFSNSSPDYLPFEFRALEVALEAACAFLDDQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGEQSMVGYKSVDGASISAPVSPVSSPPDSRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIELFDVPSAFQWVLIITGVCGVCIFSAFVWFFKYRRLMPL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1563 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 443 IPR039204 -
Aed1g1563 443 Gene3D - 40 123 - -
Aed1g1563 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Aed1g1563 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 443 - -
Aed1g1563 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Aed1g1563 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Aed1g1563 443 Gene3D Magnesium transport protein CorA, transmembrane region 131 374 - -
Aed1g1563 443 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1563 Aed-Chr1 13864376 13869013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1563 1 443 MRS2 Gene Family AT1G16010 85.135 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1563 K16075 - gmx:100801387 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1563 1 13864376 13869013 Aed1g1563 1 13864376 13869013 ECH