Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1561 ATGCTCATCTCCTCGACTCACTTTTTCTTCATCACCAGTTGCTGTGATCAACATCCAACACACCACACCATGCCTTCAAGACCCTTCCCTCCCACAAATCCCACCAAAACCAAGGCCCTCTTCCTAGCACTCACCATTTCAGCTTGTGTTGTGATCTTCTGCTCAATCCTTTACTTCCTCTACCATCTGTGGCATTCTCTTGTTCACAGAGCTAAGACCATTCCCTTTGATGCAAGTGCTCCCCTGAAGCTCCAAAGATTCTCATACAAAGATTTAAAACAAGCAACCAATGGCTTTGACACTGCCAATGTAATTGGCAAAGGTGGCTCTGGCACTGTTTTCAGAGGAGTACTTAAAGACGGCAAGTTGATTGCCATCAAACGCCTGGACGCGTTGTCTTTGCAGTCAGAGAGAGAGAGCCAGGATCTATGGAAAAGCCAAGAGCTTTCAGGTAATTTAACTGCAGAAACTCCTGCTATTGGTACTCCAGTTGAGAGTGTTAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCTTCCAAAAATAGTAGGACTTGCTTTAATGTCAAGGCTTTGCACTTGAATTCTTTGAATTATAATGCCAATATTGCTTGTGAAAGTGAAATTAGGAGTGTAAATGCAAAGGGCAAGGAAATTTCAACTTTGGATAGGGATGATTGGAACGGTAAGTTTTTCCCCTGTGATGATGAGCTTTCTAGCATTGATTATAGTAAGGAGTTACCTGTGAATGCTTCTCCTTTGGTGGATGATGAGAAGGAAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGAGAGTTGTGTAGTAAAGACTATGTTATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACGCTGATTGGGATGATGGTAAGAACAATGTTCGCGCAAAAGTAGAGTTGGAAAATTCAAGTCCCAAGGATAAAGACCGTGATTCTGTTGCACCCAAATCACAGGTTTTTGGGATAGGACATAATACTACAGATAATGGGATTGAGAAAAAAGAGTCAATGATGGGAAAGAAAAATCACAAAAAGAAGCACAGGAAGATGCAGGAGTGGTGGAGAGAAGAGCATCTTGCTGAATTAAGCAAGAAGACCAGTAAACTTAAAAATCTTCATAGTAAGTGGAAGAAAGGCATGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTTTATCTTTGCAGGCGTAAGAAGTTTGGAGAGGAGGGTGAGAATGAATGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGCTGGAAGAAGAAAAACACTCATTCCATTGGAAGTGAGATGTGGAGTGGAGATCTTTTCAGCCGTGAGCTCAGCAGCACAACTAGCATGAGAGGGACACTGTGTTATGTAGCACCAGAATATGGAGGCTGTGGATTCTTAATGGAGAAAGCTGACATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGGAGACCATTGCATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAACTTGTGGATGAGAGATTGAAAGAAGATTACAACAAGGACCAAGCAAGTCTGTGTATCAACTTGGCACTCATTTGCTTGCAGAAAATTCCAGAGCTGCGGCCAGATATTGGGGATATTGTTAAGATTGTGAAGGGGGAGATGGAGCTTCCACCACTTCCATTTGAATTCTCCCCTTCTCCACCTTCCAAATTATACAGCAAATCAAGGAGAAAACCGAAGGGCACTGCAGAATAG 1827 0.4242 MLISSTHFFFITSCCDQHPTHHTMPSRPFPPTNPTKTKALFLALTISACVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGVLKDGKLIAIKRLDALSLQSERESQDLWKSQELSGNLTAETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKALHLNSLNYNANIACESEIRSVNAKGKEISTLDRDDWNGKFFPCDDELSSIDYSKELPVNASPLVDDEKENGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNADWDDGKNNVRAKVELENSSPKDKDRDSVAPKSQVFGIGHNTTDNGIEKKESMMGKKNHKKKHRKMQEWWREEHLAELSKKTSKLKNLHSKWKKGMKVPHFDLGRRFYLCRRKKFGEEGENECDQNGEFSFRRGWKKKNTHSIGSEMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKEDYNKDQASLCINLALICLQKIPELRPDIGDIVKIVKGEMELPPLPFEFSPSPPSKLYSKSRRKPKGTAE 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1561 608 MobiDBLite consensus disorder prediction 584 608 - -
Aed1g1561 608 SUPERFAMILY Protein kinase-like (PK-like) 78 130 IPR011009 -
Aed1g1561 608 MobiDBLite consensus disorder prediction 315 329 - -
Aed1g1561 608 PANTHER OS07G0586332 PROTEIN 24 141 IPR044576 -
Aed1g1561 608 PANTHER OS07G0586332 PROTEIN 146 607 IPR044576 -
Aed1g1561 608 SUPERFAMILY Protein kinase-like (PK-like) 457 591 IPR011009 -
Aed1g1561 608 Gene3D Transferase(Phosphotransferase) domain 1 432 579 - -
Aed1g1561 608 ProSiteProfiles Protein kinase domain profile. 99 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1561 608 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
Aed1g1561 608 SMART serkin_6 99 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1561 608 MobiDBLite consensus disorder prediction 315 346 - -
Aed1g1561 608 PANTHER OS08G0275200 PROTEIN 24 141 - -
Aed1g1561 608 PANTHER OS08G0275200 PROTEIN 146 607 - -
Aed1g1561 608 Gene3D Phosphorylase Kinase; domain 1 75 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1561 Aed-Chr1 13854480 13856681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1561 459 583 Receptor kinase-like Gene Family AT1G07650 39.200 4.68e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aed1g1561 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1561 - - gmx:100800845 874.389