Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1555 ATGCCTCTCTCACTTGGTTTACTACGAACTTCACAATCTTTCAACATTTCTACTTTCTTCACATATATTTTCCTTATGGATTATTCATCATGGATTAACACTTCCTTGGACCTCAACATTAATCCTCACAGCCACAGGGTTCATGAACAAGTAATCTTTCCCAAAAAAGAGGTACTGGAAAACAATATTTTATCTTCCGTAAAAGAAGAGGTTAGTTCATCTTCATCAAGCTTGGTGGAGGAGCTGAAGCGGGTGAGTGAAGAAAACAAGAAATTGACCGAAATGCTAACGGAGATGTGTGAGAATTACAACACCTTGCGAAGCAATTTGATGGAATATATGAGAAAGGAGGCCAGCTCGTCAAAGAAAAGGAAGTCCGAAAGTAACGGAACCTCCGAAAGCAGCTCAACTGATGAAGAATCGCGCAAGAAAGCAGACGCCAAAATTTCAAGAGTTTATACGAAGACACAATCATCTGATACAACCCTTGTAAGATTCGTTCATTCACAAAACTCATCAATTGTTGTGACGACAGGCTTCTCATTTATTTCTTCCTTCCAGATTGTGAAAGATGGATACCAATGGAGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCATACTTCAAGTGCTCCTTTGCTCCAAGCTGCCCAGTAAAAAAAAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATCCCCAGCCTTCTCAAATGGAGGTAACACCAGGCCCCACCACCACCACCCGTTGTGTATCCAAGAATATAAATCCCAAAATCGAATCACCGCAAGTCCCGCACCAGGTTTTGGTAGAACAGATGGCTACTTCCTTGACCGAGGATCCTAATTTCAGAGCAGCACTAGTTGCCGCCATCTCAGGAAAAATAACTCATTCTTCTTTATAG 948 0.4177 MPLSLGLLRTSQSFNISTFFTYIFLMDYSSWINTSLDLNINPHSHRVHEQVIFPKKEVLENNILSSVKEEVSSSSSSLVEELKRVSEENKKLTEMLTEMCENYNTLRSNLMEYMRKEASSSKKRKSESNGTSESSSTDEESRKKADAKISRVYTKTQSSDTTLVRFVHSQNSSIVVTTGFSFISSFQIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQPSQMEVTPGPTTTTRCVSKNINPKIESPQVPHQVLVEQMATSLTEDPNFRAALVAAISGKITHSSL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1555 315 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 185 313 IPR044810 GO:0003700
Aed1g1555 315 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 29 164 IPR044810 GO:0003700
Aed1g1555 315 Pfam WRKY DNA -binding domain 190 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g1555 315 SUPERFAMILY WRKY DNA-binding domain 183 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g1555 315 SMART WRKY_cls 189 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed1g1555 315 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 185 313 - -
Aed1g1555 315 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 29 164 - -
Aed1g1555 315 Gene3D WRKY domain 171 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed1g1555 315 MobiDBLite consensus disorder prediction 116 152 - -
Aed1g1555 315 MobiDBLite consensus disorder prediction 136 150 - -
Aed1g1555 315 Coils Coil 75 102 - -
Aed1g1555 315 ProSiteProfiles WRKY domain profile. 184 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1555 Aed-Chr1 13818908 13822318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1555 29 310 WRKY Transcription Factor Family AT1G80840 47.024 1.79e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed1g1555 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1555 - - gsj:114388658 327.02