Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1554 ATGGATCGGCGATCGAGCAGCAGGAACATCCTGTTCAACAAGTACGAGATAGGGAAATTGCTGGGACAGGGGAACTTCGCCAAGGTGTACCACGGCAGAAACCTGAGCACAAACGAGAGCGTGGCCATTAAGGTCATAAAAAAAGAGAGGCTCCAAAAAGAGAAGCTGGTAAAGCAGATAAAACGTGAGGTATCGGTGATGCGCTTGGTACGTCACCCCCACATCGTGGAATTAAAAGAAGTGATGGCCAACAAGGCCAAAATCTTCATGGTCGTCCAATACGTCAAGGGAGGGGAGCTCTTCGCCAAGCTTGCTAAGGGGAAGATGAAGGAAGACGTCGCCCGTAAGTACTTTCAACAACTCATAAGCGCCGTCGACTTCTGCCACAGCCGCGGGGTAACCCACCGCGATTTGAAGCCCGAGAATCTCCTCCTGGACGAGAACGAAGACCTTAAAGTCTCCGACTTTGGATTGTCCGCGCTGCCCGACCAGCGCAGATCCGACGGGATGCTCGTGACGCCCTGCGGTACGCCCGCCTACGTGGCACCGGAGGTTCTGAAGAGGAAAGGCTACGACGGCTCCAAGGCTGATATATGGTCATGCGGTGTCATCCTCTTCGCTCTCCTCTCTGGCTATCTGCCCTTCCAAGGTGATAATGTCATGAGAATTTACAGCAAGTCTTTCAAGGCTGATTATGCATTCCCCGAATGGATATCCCCTCAGGCCAGAAACCTCATCTCTCATTTACTCGTTGTGGACCCGGAAAAGAGGTTTTCCATTCCTGACATCATCAAGGACCCTTGGTTTCAATATGGATTCATGAAGCCCATTGCGTTTTCCATCAAGGAGACGGCTTTAGATGACAACATTGATTTCAACACCACCACCACCAGCAGCAGTGATGAGAACGACGATGGTGGGGATCAACAACTCTTCAAGGGGCCTGCTCGGCCGTCTTACAACGCTTTTGAGATAATATCATCCTTGTCCCATGGCTTCGATCTTAGAAATCTATTTGAGACGGGGAAGCGGTCGCCGTCGATGTTCATTTCCAAGCATTCGGCGTCGACGGTGCTTGCGAAGCTGGAAGGGGTGGCAAAGAAGCTCAACTTTAGGGTGACGGGGAAGAAGGAGTTCATGGTGAAGATGCAGGGAGCAACGGAAGGGAGGAAGGGGAAGGTGGCCATGACGGTCGAGGTATTCGAGGTGGCGCCGGAGGTCGCCGTCGTCGAGTTCTCCAAGTCCGCCGGAGACACCCTTGAGTACCTTCAATTCTGTGAGGACCAAGTCAGACCTTCGCTCAAGGACATTGTCTGGACTTGGCAAGGGGACGCCGCCAATGCCAATTCATTTTAG 1356 0.5243 MDRRSSSRNILFNKYEIGKLLGQGNFAKVYHGRNLSTNESVAIKVIKKERLQKEKLVKQIKREVSVMRLVRHPHIVELKEVMANKAKIFMVVQYVKGGELFAKLAKGKMKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLVTPCGTPAYVAPEVLKRKGYDGSKADIWSCGVILFALLSGYLPFQGDNVMRIYSKSFKADYAFPEWISPQARNLISHLLVVDPEKRFSIPDIIKDPWFQYGFMKPIAFSIKETALDDNIDFNTTTTSSSDENDDGGDQQLFKGPARPSYNAFEIISSLSHGFDLRNLFETGKRSPSMFISKHSASTVLAKLEGVAKKLNFRVTGKKEFMVKMQGATEGRKGKVAMTVEVFEVAPEVAVVEFSKSAGDTLEYLQFCEDQVRPSLKDIVWTWQGDAANANSF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1554 451 Coils Coil 43 63 - -
Aed1g1554 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Aed1g1554 451 PANTHER CBL-INTERACTING PROTEIN KINASE 16 6 448 - -
Aed1g1554 451 SMART serkin_6 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1554 451 ProSiteProfiles Protein kinase domain profile. 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1554 451 Gene3D Kinase associated domain 1, KA1 322 440 - -
Aed1g1554 451 CDD CIPK_C 321 435 - -
Aed1g1554 451 ProSitePatterns Protein kinases ATP-binding region signature. 21 48 IPR017441 GO:0005524
Aed1g1554 451 Pfam NAF domain 319 374 IPR004041 GO:0007165
Aed1g1554 451 Gene3D Transferase(Phosphotransferase) domain 1 7 321 - -
Aed1g1554 451 SUPERFAMILY Protein kinase-like (PK-like) 11 309 IPR011009 -
Aed1g1554 451 Pfam Protein kinase domain 15 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1554 451 ProSiteProfiles NAF domain profile. 315 340 IPR018451 GO:0007165
Aed1g1554 451 PANTHER - 6 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1554 Aed-Chr1 13812123 13813478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1554 1 449 CBL-interacting serine-threonine protein kinases AT5G25110 59.243 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed1g1554 Pkinase 1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1554 - - gmx:100804244 759.214