Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1552 GAGTCGGGGTGGGCATCTATTTTCCCTATAAAACGCAGTCCCACTACTCTCAGCCACTCACCAACTTGTTTCTTTGTTCAGTTCTGCTTTCCCAACATCATCATGCCTTCTGCATCATCATCATCACCTTCCTCCGAAACCATTTGTGTCACCGGCGCCGGTGGCTTCATCGCTTCTTGGATGGTGAAACTCCTCTTGGAAAAAGGCTACACTAACGGGCACTTGAAAGAGTTGGAAGGAGCATCGGAGAGACTAAGTCTGCACAAGGTTGACCTCCTTGATCTAGAGTCCGTTAGATCAGTTATTAACGGCTGCGATGGTGTCTTTCACACAGCTTCTCCCGTGACCGATAACCCGGAAGAAATGGTGGAGCCAGCGGTGAGTGGAGCTAAGAATGTGATAATAGCAGCTGCAGAGTCAAAAGTGCGACGTGTGGTCTTCACCTCATCAATTGGTGCCGTCTATATGGACCCCAAAAGGAGCATCGACTTGCCGGTTGACGAGTCCTGTTGGAGTGATTTAGAATTTTGCAAGAACACAAAGGCAAGCAAGCTGTTAAATTGGTATTGCTATGGTAAGGCTGTGGCTGAACAAGCAGCTTGGGACACAGCAAAAGAGAAAGGTGTGGACTTGGTTGTGGTTAACCCAGTTTTGGTACTTGGACCGTTGCTTCAACCAACCATAAATGCTAGTACAATCCACATCCTAAAGTATCTAACTGGCTCTGCTAAAACCTATGTAAATGCCACACAGGCTTATGTGCATGTTAAGGATGTGGCGTTGGCCCACATACTTGTTTACGAGAACCCTTCTGCTTCAGGTAGATACTTATGTGCCGAATCATCCCTGCACCGTGGAGAATTAGTCCAAATTCTTGCCAAGTATTTCCCGGACTACCCTGTTCCCACCAAGTGTTCAGATGAGAAGAACCCGAGAGCAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCAGTGTCTATATGAAACGGTGAAGAGCCTGCAGGAGAAAGGCCACCTTCCTCTTCCTGCAAATGCAAAGCAGCAGGAAGAAGATTCAACAGCCGTGAAATCCTAA 1107 0.4679 ESGWASIFPIKRSPTTLSHSPTCFFVQFCFPNIIMPSASSSSPSSETICVTGAGGFIASWMVKLLLEKGYTNGHLKELEGASERLSLHKVDLLDLESVRSVINGCDGVFHTASPVTDNPEEMVEPAVSGAKNVIIAAAESKVRRVVFTSSIGAVYMDPKRSIDLPVDESCWSDLEFCKNTKASKLLNWYCYGKAVAEQAAWDTAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVHVKDVALAHILVYENPSASGRYLCAESSLHRGELVQILAKYFPDYPVPTKCSDEKNPRAKPYIFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPLPANAKQQEEDSTAVKS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1552 368 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 43 354 - -
Aed1g1552 368 Gene3D - 37 366 - -
Aed1g1552 368 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 345 IPR036291 -
Aed1g1552 368 CDD FR_SDR_e 49 328 - -
Aed1g1552 368 Pfam NAD dependent epimerase/dehydratase family 48 272 IPR001509 -
Aed1g1552 368 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 43 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1552 Aed-Chr1 13799573 13801668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1552 48 304 Monolignol Biosynthesis Gene Families AT1G80820 69.517 6.01e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1552 K09753 - gmx:100789070 577.015