Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1542 ATGAGGCGAAAGGGTGTGGGAACGACGGGAGTGAAGAGTTGGACGGTGGTGTCGGAGACAGGGCATGCACGGCTTGAAGAAGTTGGAAAACAGTCGACAATGCAAAGAACAGGGTTGCTGGCGCGTGACCTTAGGGTCCTCGATCCTGTTCTGTCATATCCTTCTTCCATCCTAGGACGTGAAAGAGCCATCGTTGTCAACTTGGAACACATCAAAGCAATAATCACTGCCTCCGAGGTCCTCATCATCAACTCTTCCAACCCTTTCTTTCCTTCCTTCCTTCAAGATCTTCATTCCCGTCTTTCCAATAATCAAAATCTCTCCTCGATGAGCAATGACATGGATGCAGGTGATGGTTACAAAGAAAAATGTTTAGCGAATGATTCACCTGATCGCCCTAGTGCAGAGACTGTAAGTGCAGCAGGAACACCACCTCCTAAGCCGTTACCTTTTGAGTTTAAAGTACTTGAGGCATGTATTGAATCTGCTTGCAGGTGCCTTGAATCAGAGACTTCAACATTGGAGGTAGAGGCTTATCCAGCTTTAGATACATTGACCTCTCAACTTAGCACACTCAATCTTGAACGAGTAAGACAGATCAAGAGTCGTTTGGTTACACTCTCCGGTCGTGTACAAAAGGTAGCAGATGAACTCGAACATTTGTTGGACGATGATAATGACATGGCCGAAATGTGCTTGACGCAAAAGCTTAATGCTCCTTCATTTGATCATACATCATTAATAAGAGAAGGGTACAATTTGGAATTAGAAGATAATGGTGAAAGTGATAAATCAAATTCAGAAAGGTTTGACAAATTCGCTTGTCTAAAACTTGACGTTGAGGAATTGGAGATACTTCTAGAAGCATATTTTGCTCAGACAAATGGTATCTTGCAAAGATTGTCTAGTTTGAGTGAGTATGTGAATGACACGGAGGACTACATAAACATAATGCTGGATGATAAGCAAAATGAGCTTCTGCAGGCTGCAGTAATATTGGAAACAGTAACCATGATACTTAGTGCCGGTATAGTGGTGGTTGGATTGTTTGGGATGAATATTCACATATGA 1071 0.4267 MRRKGVGTTGVKSWTVVSETGHARLEEVGKQSTMQRTGLLARDLRVLDPVLSYPSSILGRERAIVVNLEHIKAIITASEVLIINSSNPFFPSFLQDLHSRLSNNQNLSSMSNDMDAGDGYKEKCLANDSPDRPSAETVSAAGTPPPKPLPFEFKVLEACIESACRCLESETSTLEVEAYPALDTLTSQLSTLNLERVRQIKSRLVTLSGRVQKVADELEHLLDDDNDMAEMCLTQKLNAPSFDHTSLIREGYNLELEDNGESDKSNSERFDKFACLKLDVEELEILLEAYFAQTNGILQRLSSLSEYVNDTEDYINIMLDDKQNELLQAAVILETVTMILSAGIVVVGLFGMNIHI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1542 356 Gene3D Magnesium transport protein CorA, transmembrane region 90 326 - -
Aed1g1542 356 PANTHER MAGNESIUM TRANSPORTER MRS2-F 2 356 - -
Aed1g1542 356 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 356 IPR039204 -
Aed1g1542 356 CDD Mrs2_Mfm1p-like 14 356 IPR039204 -
Aed1g1542 356 Gene3D - 6 86 - -
Aed1g1542 356 MobiDBLite consensus disorder prediction 118 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1542 Aed-Chr1 13750627 13763313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1542 13 356 MRS2 Gene Family AT3G19640 48.111 6.39e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1542 - K16075 gmx:100808805 523.857