Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1533 ATGGTTCTGAAAGCTGGTAGCAGACCTCCATGGGTGGGTCTTGCGGCTGCAGTTTGGATTGAAATAGCAGCTGGCAATGCATACAACTTCCCTCTCTATTCCTCTGCCCTCAAATCCGTGTTGGGTCTCAATCAGCAACAGGTCACTATTCTTGGAGTGGCCAATGATGTTGGGGAGAACATGGCTCTTCTTCCCGGCATTGCCTCCAACAAGTTCCCTCCTTGGGCTTTGCTTCTTCTTGGTTCTCTCCTTTGTTTCTTTGGTTATGGCCTTATCTTCCTTACTGTTACCCAAACTGTTTCCCAATTCCCCTATTTCCTGTTATGGCTCGCCCTTTGTGTTGCTACTAACAGCAATGCTTGGTTTGGCACATCTGTGCTTGTCACCAACATGAGAAACTTTCCTCTCAGTAGAGGCACCATCTCTGGCATTCTTAAAGGTTATGCGGGGATTAGTGCTGCAGTATACACCCTAATATATAGCATGGTGCTGAAAGGATCTGCTTCTGGATTACTCTTGTTCTTAGCAATTGGACTCCCAGCTTTATGTTTTGTTATGATGTTCTTCATTCGGCCTTGCACTCCTCCTTCAGGGGAAGACTCTTCAGTGCACGTGCATTTTATTTTTGTCCAAGTTGCAAGTATTTTACTTGCCTCCTATCTTGTTATCACCACAATTGTGAGTGACGTGGTCTCTATAAATGCTACTGTAACCTACATCTTGGTTGCCATAATGGTTATACTTCTCATGACTCCCCTAGCAATTCCTTTCAAAATGACACTATTTCCTGCTGCTAATTCAAGTACCAATGTTGGTTCTTCAACGCAAACTAGTCCATTGCTCACTCTTGGAAGTTTTGATGAAGATGCTTCAGATGTTGAGATACTCATTGCAGAAGGAGAGGGGGCAGTGAGGGAGAAAAAGAGACCTAAGAGGGGAGACGATTTCAAGCTCCGCGAAGCATTGGTCAAGGCTGACTTCTGGCTTCTTTGGCTTGTTTTTTTTCTTGGGGTTGGCTCAGGAGTCACAGTTCTCAATAATTTGGCTCAAATTGGAGTTGCCTCAGGTGTAGAAGATACAACCATACTTCTGTCAGTCTTCAGCTTTTGCAATTTTATGGGTCGTCTTGGCTCTGGTGTTGTTTCTGAACACTTTGTCAGGTTGATAACACTGCCTCGAACATTTTGGATGACAAGTACACAAGTAATTATGATGTTAGCATTTTTATTGTATGCTTCTGGTCTTGATGGCACTCTTTATGCTGCAACGGCATTGCTTGGGATCTGCTATGGGGTTCAATATTCTATAATGATTCCAACTGTCTCGGAGCTTTTTGGTTTGAGGCACTTTGGTGTTATTAGTAGCTTCATGATGCTAGGAAATCCAATTGGTGCCCTTATTTTCTCTGTTTTCCTTGCGGGGAATGTGTATGATACAGAAGCTGCAAAGCAAGGAAACTCCACTTGCTATGGTTCACATTGCTTCAGGCTCACTTTTCTGGTTTTGGCTGCTGTCTGTGGACTCGGTACCATCTTGAGTATAATTTTGACACTTAGAATACGACCAGTTTATCAAATGCTATATGCTGGGGGTTCATTTCGTCTATCTCAGACTTCAAACCACTGA 1626 0.4354 MVLKAGSRPPWVGLAAAVWIEIAAGNAYNFPLYSSALKSVLGLNQQQVTILGVANDVGENMALLPGIASNKFPPWALLLLGSLLCFFGYGLIFLTVTQTVSQFPYFLLWLALCVATNSNAWFGTSVLVTNMRNFPLSRGTISGILKGYAGISAAVYTLIYSMVLKGSASGLLLFLAIGLPALCFVMMFFIRPCTPPSGEDSSVHVHFIFVQVASILLASYLVITTIVSDVVSINATVTYILVAIMVILLMTPLAIPFKMTLFPAANSSTNVGSSTQTSPLLTLGSFDEDASDVEILIAEGEGAVREKKRPKRGDDFKLREALVKADFWLLWLVFFLGVGSGVTVLNNLAQIGVASGVEDTTILLSVFSFCNFMGRLGSGVVSEHFVRLITLPRTFWMTSTQVIMMLAFLLYASGLDGTLYAATALLGICYGVQYSIMIPTVSELFGLRHFGVISSFMMLGNPIGALIFSVFLAGNVYDTEAAKQGNSTCYGSHCFRLTFLVLAAVCGLGTILSIILTLRIRPVYQMLYAGGSFRLSQTSNH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1533 541 SUPERFAMILY MFS general substrate transporter 9 195 IPR036259 -
Aed1g1533 541 CDD MFS_Mch1p_like 9 510 - -
Aed1g1533 541 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 2 541 - -
Aed1g1533 541 SUPERFAMILY MFS general substrate transporter 229 522 IPR036259 -
Aed1g1533 541 Pfam Nodulin-like 10 257 IPR010658 -
Aed1g1533 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 541 - -
Aed1g1533 541 Gene3D MFS general substrate transporter like domains 303 525 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1533 Aed-Chr1 13719240 13721012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1533 4 541 Nodulin-like Gene Family AT1G80530 60.791 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1533 - - adu:107459780 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1533 1 13719240 13721012 Aed1g1533 1 13719240 13721012 ECH