Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1532 ATGTCTTACAGAAAGGATAATAACAGTTATTCTTCCTTACCAGTTAGCTCCTATCTAGAATTGCAGCATCAAAACGATTCCTCAAAATCCTTTCAAAGGCCTACTTATGACGAATCCGAGGTGTATTTAGGATCCAAGGTCGACGACGAGGAGGACGATGAGGATTTGGAAATCGACATCGATAATTACCCCCTTGTCGTTATGGGGCCGAATCCGGGTTCTGGGGTACCTGGGGCTGTTTTCAATTTAACTACCACAGTCATTGGGGCTGGGATTATGGCCCTCCCTGCCACTATGAAAGTTCTAGGAGTGGTTTTGGGGATTGTTTTGATTATTGTTATGGGAATTTTGTCTGAAATTAGCGTGGAATTGTTGGTCAGGTTTTCTGTTTTGCTCAAGGCATCCTCCTATGGGGAGGTTGTTCAACATGCTATGGGTAAGCCTGCCAGGATTTTGTCTGAAATTTGTATTATTGTCAACAATGCTGGTGTTTTGGTCGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCCGTTCATCATATGGGGGTTTTTGATCAGTTAGTGGGGAACGGGGGTGTGTGGGATCAGAGGAAGCTTGTCATTTTTGTTGTCATGGTTGTTTTCCTTGCTCCCCTTTGCTCACTTGACAAGATTGATTCCTTGAGCTTGACCTCCGCCGCCTCTGTCGCTCTTGCTATCTTGTTTGTCATTGTCACCTTTACTGTTGCTTTCATTAAGCTCCTGGAAGGACGCACTGATCCTCCCAGGATGGCTCCTGATTTTAGCTCCAAAACCGCCATCTTGGATTTGCTTGTTGTCATTCCCATCATGACCAATGCCTTTGTTTGCCATTTTAATGTGCAGCCCATATACAACGAGCTTGAACAGCGCTCTCCCCAGAAGATGAACCGAGTTGGAAGGTACACCACAGTTTTGTGCATCCTAGTTTATTCTTCCACTGCCATATCTGGTTACCTGCTCTTTGGGAATGATACTGAGTCTGATGTGCTGACTAATTTTGATAAGGATCTAGGAATTCGGTTTAGCTCCGTCTTGAACTATATTGTCCGGGTTGGCTACATTCTTCATTTAATACTTGTTTTTCCTGTTATTCATTTCTCACTGCGCCAAACAGTGGATGCATTAGTGTTTGAGGGATCACCTCCTCTATCAGAAAGTAGGAAGAGATCTCTGGGGTTGACTGTGGTTCTGTTGGTCCTCATATATATTGGGTCTACCATGATTCCAAGCATCTGGACAGCTTTTAAGTTCACTGGAGCAACAACGGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTGCATTGAGATTAAGTCATCAGGGGGACTTAAGCTATGGGGAATGGATTTTATCTTGGTTGATGTTGGTATTGGCTGTGACTGTTAGCATAGTAGGAGTTGTTGGCAATATCTATAGCCTTGAGAGTAAGTCTTAG 1464 0.4351 MSYRKDNNSYSSLPVSSYLELQHQNDSSKSFQRPTYDESEVYLGSKVDDEEDDEDLEIDIDNYPLVVMGPNPGSGVPGAVFNLTTTVIGAGIMALPATMKVLGVVLGIVLIIVMGILSEISVELLVRFSVLLKASSYGEVVQHAMGKPARILSEICIIVNNAGVLVVYLIIMGDVMSGSVHHMGVFDQLVGNGGVWDQRKLVIFVVMVVFLAPLCSLDKIDSLSLTSAASVALAILFVIVTFTVAFIKLLEGRTDPPRMAPDFSSKTAILDLLVVIPIMTNAFVCHFNVQPIYNELEQRSPQKMNRVGRYTTVLCILVYSSTAISGYLLFGNDTESDVLTNFDKDLGIRFSSVLNYIVRVGYILHLILVFPVIHFSLRQTVDALVFEGSPPLSESRKRSLGLTVVLLVLIYIGSTMIPSIWTAFKFTGATTAVSLGFIFPSLVALRLSHQGDLSYGEWILSWLMLVLAVTVSIVGVVGNIYSLESKS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1532 487 PANTHER AMINO ACID TRANSPORTER 50 486 - -
Aed1g1532 487 Pfam Transmembrane amino acid transporter protein 74 478 IPR013057 -
Aed1g1532 487 PANTHER AMINO ACID TRANSPORTER AVT6E 50 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1532 Aed-Chr1 13714842 13716305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1532 7 487 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.690 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1532 - - gmx:100791860 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1532 1 13714842 13716305 Aed1g1532 1 13714842 13716305 ECH