Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1531 ATGGATCGAGAATGGGGATCGAAGCCGGGGAGCGGAGGTGCGGCGTCGGCGCAGAACGAAGCCATCGACCGGCGAGAGCGTCTCCGGCGACTGGCTCTGGAGACCATAGACCTGGCGAAGGATCCCTATTTCATGCGGAACCACCTGGGAAGCTACGAATGCAAACTGTGTCTGACTCTCCACAACAACGAGGGGAACTACTTGGCACACACTCAGGGGAAGCGGCACCAAACGAACTTGGCGAAACGTGCCGCTCGCGAGGCGAAGGACGCACCCGCCCAGCCCCAACCCCACAAACGCAAAGTCACTCTTAGAAAAACAGTCAAGATTGGACGACCTGGCTACCGTGTTACCAAGCAGTATGACCCCGACACTAAACAAAGATCTCTCCTTTTCCAGATTGAATATCCTGAGATTGAAGATCTCTCCAAGCCCAGGCATCGTTTTATGTCCTCCTACGAACAGAGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCGGCGGAACCCTATGAAATTGTTGCTTTCAAGGTGCCTAGCACGGAGATTGACAAGTCCACTCCTAAGTTCTTCTCGCACTGGGATCCTGACTCAAAGATGTTCACGCTGCAATTGTATTTTAAAACAAAGCCGCCAGAGGCGAACAAACCGCAGCCTGCCTCTACTGCTAATGGCACAGTGCCATCTGGTGGTGTTCCACCAAGGCCTTTGCCCCCACCACCCCAAGCTCCACTACCACCACCTCCACCTCCTCCGCAGGGGCTACCTCCTGGTGCACCTATGGCAAATCCTCCTAGAGCTCCTCCACCTCCAATGCCGGGATCTATGCCACCTCCTCCTCCTATGGCAGCAGCTAACGGTCCTAGACCTGCACTTTCTGGTGGAATGCCATCTGTCCCACCCCCACCCCCTGTTGCAAGTGGGACAATGGGTTTCAACATGGGTGCTAGACCTCCATCAATGCCACCTCCACAAGGTTTTCCTGCCCAACCCATGCAGGGCCAGGGTGTCCGTCTTCCTCCACCACCCCCTAACATGGGACAGTAG 1056 0.5521 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVTLRKTVKIGRPGYRVTKQYDPDTKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASTANGTVPSGGVPPRPLPPPPQAPLPPPPPPPQGLPPGAPMANPPRAPPPPMPGSMPPPPPMAAANGPRPALSGGMPSVPPPPPVASGTMGFNMGARPPSMPPPQGFPAQPMQGQGVRLPPPPPNMGQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1531 351 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Aed1g1531 351 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Aed1g1531 351 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Aed1g1531 351 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Aed1g1531 351 MobiDBLite consensus disorder prediction 213 351 - -
Aed1g1531 351 MobiDBLite consensus disorder prediction 234 289 - -
Aed1g1531 351 MobiDBLite consensus disorder prediction 1 21 - -
Aed1g1531 351 Gene3D Classic Zinc Finger 46 89 - -
Aed1g1531 351 Gene3D - 94 218 - -
Aed1g1531 351 Pfam Zinc-finger of C2H2 type 52 76 - -
Aed1g1531 351 SMART CactinC_cactus_3 89 217 - -
Aed1g1531 351 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 344 - -
Aed1g1531 351 MobiDBLite consensus disorder prediction 320 351 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1531 1 228 C2H2 Transcription Factor Family AT2G32600 88.596 7.56e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1531 K12826 - vvi:100245136 484.182