Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1525 ATGGGTGCGACGTTGTTGTCGGAGCTTGGGACAGAGATAGTCGTGCCGGTGTGCGCAGTGGTGGGGATTGTGTTCTCGCTGGTGCAGTGGTACCTTGTGTCGCGCGTGAAGCTCACGCCCGAGCGCCACGGGTCCTCTTCTTCCCCATACCACGACAACGGCAACAACAAAAATGGTTACGGAGACTCCCTGATTGAGGAAGAAGAAGGCATCAATGACCACAGCGTCGTCGTTAAATGCGCTGACATACAGAGCGCCATCTCCGAAGGTGCAACGTCCTTTCTTTTCACTGAATATCAATATGTTGGGATTTTCATGGTCGTGTTTGCGGTTTTAATCTTTGTTTTCCTGGGCTCTGTGGAGAGCTTTAGTACCAAGAGCCAGCCCTGCACTTATGACAAGGGGAAGCTATGTAAACCAGCCCTTGCAACTGCACTCTTTAGCACTATTTCTTTCTTGCTTGGTGCTATTACTTCAGTTGTATCTGGTTTCCTTGGGATGAAAATTGCTACCTATGCCAATGCAAGGACAACCTTGGAGGCAAGAAAAGGAGTTGGAAAGGCTTTTATTACTGCCTTTAGATCTGGTGCAGTCATGGGGTTCCTTCTTGCAGCAAATGGTCTATTGGTGCTGTACATTGCCATTAATCTCTTCAAGCTATATTATGGTGATGATTGGGAAGGCCTCTTTGAGGCTATAACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGTGGTGGAATCTATACCAAGGCTGCTGATGTTGGTGCTGATCTGGTTGGAAAAGTTGAAAGGAATATCCCAGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAACGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCCCTAGTTGTTGCTTCGATTTCCTCATTTGGAATCAACCATGATTTCACTGCCATGTTATATCCCTTACTTATCAGTTCTATGGGTATTATTATATGTTTGATCACTACTCTTTTTGCAACTGATATCTTTGAGATTAAGGCAGTCAACGAAATTGAACCAGCATTGAAAAAACAGCTTATCATCTCAACTGTTCTCATGACTGTTGGAATTGCAATTATTAGTTTTATTGCTCTTCCAACATCCTTCACAATTTTCAACTTTGGGGCTCAGAAAGAGGTGAAGAGCTGGCAGCTGTTCTTATGTGTGGGTGTTGGTCTTTGGGCTGGACTTATTATTGGATTTGTGACTGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCTTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTGGGATACAAGTCTGTCATTATTCCTATTTTTGCCATTGCAGTCAGCATTTTTGTGAGTTTTAGTTTTGCTGCAATGTATGGTATTGCTGTTGCTGCCCTTGGGATGCTGAGCACCATTGCAACTGGGTTGGCTATTGATGCCTATGGGCCCATTAGTGACAATGCAGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGTATCCGTGAGAGAACTGATGCCCTTGATGCTGCAGGCAACACTACTGCCGCCATTGGCAAGGGATTTGCTATTGGGTCTGCCGCACTGGTGTCTTTGGCCTTATTTGGTGCCTTTGTCAGCAGGGCTGGAATTTCAACTGTCGATGTCTTGACTCCCAAGGTCTTCATTGGACTCTTAGTTGGTGCTATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGTAGGCAGTTCAACACCATTCCTGGACTCATGGAGGGTCATGCCAAGCCTGATTATGCTACATGTGTCAAGATTTCTACTGATGCATCAATTAAGGAGATGATTCCTCCAGGTGCCCTTGTCATGCTTACACCACTCATCGTTGGTATCTTTTTTGGCGTAGAAACTCTATCAGGTGTTCTTGCCGGTTCTCTAGTTTCTGGTGTGCAGATCGCAATATCAGCATCCAATACCGGTGGTGCTTGGGACAATGCTAAGAAGTACATTGAGGCCGGGGCTTCTGAACATGCCCGAACATTGGGCCCAAAGGGATCGGAACCACACAAAGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTAAAGGACACTTCAGGCCCTTCGCTCAACATCCTTATTAAGCTCATGGCGGTTGAGTCACTTGTTTTCGCTCCATTTTTTGCTGCCCACGGAGGCTTGCTTTTTAAGATCTTTTAA 2319 0.4597 MGATLLSELGTEIVVPVCAVVGIVFSLVQWYLVSRVKLTPERHGSSSSPYHDNGNNKNGYGDSLIEEEEGINDHSVVVKCADIQSAISEGATSFLFTEYQYVGIFMVVFAVLIFVFLGSVESFSTKSQPCTYDKGKLCKPALATALFSTISFLLGAITSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLISSMGIIICLITTLFATDIFEIKAVNEIEPALKKQLIISTVLMTVGIAIISFIALPTSFTIFNFGAQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLLFKIF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1525 772 Pfam Inorganic H+ pyrophosphatase 43 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aed1g1525 772 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 772 - -
Aed1g1525 772 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aed1g1525 772 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aed1g1525 772 PIRSF H+-PPtase 9 770 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Aed1g1525 772 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 772 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1525 Aed-Chr1 13659836 13665239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1525 5 635 Primary Pumps ATPases AT1G15690 88.590 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1525 K23025 - gmx:100803691 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1525 1 13659836 13665239 Aed1g1525 1 13659836 13665239 ECH